Gene Amir_6881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6881 
Symbol 
ID8331101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp8018150 
End bp8018773 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content77% 
IMG OID644947312 
Productbeta-lactamase domain protein 
Protein accessionYP_003104522 
Protein GI256380862 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGATCA CCCACTTCGG CCAGTCCTGC CTGCTCGTGG AGGCGGGCGG GGCTCGCCTG 
CTGTTCGACC CCGGCGCCTA CTCGGCCGGG TTCGAGCAGC TCACCGGGCT GGACGCGGTG 
CTGGTCACCC ACCAGCACCC CGACCACCTC GACCCGGCGC GGCTGCCCGC GCTGCTCGCG 
GCCAACCCCG GCGCGACCCT GGTGCTCGAC CCCGGTTCCG CGGCGCGGCA CCCGGACCTC 
GGCGCGACGA CCGCCGAACC GGGCGCGGAG CTGGAGCTGG GCGGCGCGCG CGTCCGGGTG 
CTGGCCGCGC CGCACGAGGA GGTCCACCCC GCGATCCCGC TGCCGCCGAA CGTCGGCTAC 
CTGGTCGACG GCTTCTACCA CCCCGGCGAC TCGCTCGCCC CGCCCGGCGA GCCCGTGGAC 
GTGCTGGGCC TGCCCGCCGC CGCCCCGTGG CTGAAGCTGT CCGAGGCGGC CGACTTCCTG 
GCCGCGATCG CCCCGCGCGT CGCGGTGCCG ATCCACCAGG CCGTGCTCGC GGACCCGACC 
CTGCACCACA CCGTGCTCAC GTCCACGGCC CCCGCCGGGA CGTCCGTGGT GGTGCTAGCG 
CCGGGTGAGC CGACCGAGGT CTGA
 
Protein sequence
MRITHFGQSC LLVEAGGARL LFDPGAYSAG FEQLTGLDAV LVTHQHPDHL DPARLPALLA 
ANPGATLVLD PGSAARHPDL GATTAEPGAE LELGGARVRV LAAPHEEVHP AIPLPPNVGY 
LVDGFYHPGD SLAPPGEPVD VLGLPAAAPW LKLSEAADFL AAIAPRVAVP IHQAVLADPT 
LHHTVLTSTA PAGTSVVVLA PGEPTEV