Gene Amir_6875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6875 
Symbol 
ID8331095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8012143 
End bp8012931 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID644947306 
ProductLysozyme 
Protein accessionYP_003104516 
Protein GI256380856 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCCAC TCGTCCGACG CGCGGTCGCC GCGCTCGCCT GCGCCGCCGC CGCGCTGTCC 
ACATCGGCGT CACCGGCACT GGCCCTGCCC GAGGGCGACC ACGCCATGGG GTCCCAGATC
GCCAAGCACG AGGGCGCCGC CGCGCGCCAC GTCGAGCCGC GCGGGCCTTC CGCCGCCGCG
GCCGTCTACG GCATAGACGT CAGCAGCTAC CAGGGCAACG TGGACTGGGG AGGTCAGTGG
AACGCCGGGC GGCGGTTCGC CTACGTCAAG GCGACCGAGG GGACCACGTA CAAGAACCCC
TACTTCGCCC AGCAGTACGA CGGCTCCTAC GGCGTCGGCA TGATCCGGGG CGCATACCAC
TTCGCGCTGC CCGCGAACTC CAGCGGCGCC GCCCAGGCCA ACCACTTCGC GAGCAACGGA
GGGGGCTGGT CCAGGGACGG GCGGACGCTG CCCGGCGCGC TGGACATGGA GTACAACCCG
TACGGCAGCA CCTGCTACGG CCTGTCCCCG TCCGCGATGA CCAACTGGAT CAAGGACTTC
AGCGACACCT ACCGGGCGCG CACCGGGGTC TACCCGGTGA TCTACACGTC CACGAGCTGG
TGGAACCAGT GCGTGAGCGG GGACTTCAGC GGCACCAACC CGCTCTGGGT CGCGCGGTAC
GCGTCCACGG TCGGGACGCT GCCGCGCGGG TGGAGCGTCT ACACGATGTG GCAGTACTCG
TCGTCGCCGA TCGACCAGAA CGAGTTCAAC GGCGGCTACG ACCGGCTGCA GGCGCTCGCG
TACAGCTGA
 
Protein sequence
MRPLVRRAVA ALACAAAALS TSASPALALP EGDHAMGSQI AKHEGAAARH VEPRGPSAAA 
AVYGIDVSSY QGNVDWGGQW NAGRRFAYVK ATEGTTYKNP YFAQQYDGSY GVGMIRGAYH
FALPANSSGA AQANHFASNG GGWSRDGRTL PGALDMEYNP YGSTCYGLSP SAMTNWIKDF
SDTYRARTGV YPVIYTSTSW WNQCVSGDFS GTNPLWVARY ASTVGTLPRG WSVYTMWQYS
SSPIDQNEFN GGYDRLQALA YS