Gene Amir_6874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6874 
Symbol 
ID8331094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8011169 
End bp8012017 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID644947305 
ProductLysozyme 
Protein accessionYP_003104515 
Protein GI256380855 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCGG AGGGCCGAAC ACGCAGGTGG GCGACCCGGT GGGGCCTGCC AACCACGGCG 
GCGGCGGTGC TGCTCGCCGT GGCGCACACC ACCGCGCTGA ACGCCGAGCC GCTGCCCGAC
GAGGGGGCGC CGGAGGGCTC GGACCAGCAC TACGCGGGCT CGGAGATCGC CAAGCGCGAG
GGCTGGGCGG GCGCCCGGTC CTCGGCGGCG CCCGACCCGA CGGGCAAGGT GCCCGGCATG
GACGTGAGCA GCCACCAGGG CGACGTGGAC TGGGGGCGGC CGTGGGGCGA CGGGGCGCGG
TTCGCCTACG TCAAGGCGAC CGAGGGCACC GGGTACACCA ACCCGCACTT CCAGCAGCAG
TACGAGGGGT CGCGCGGCGT CGGCATGGTG CGCGGGGCGT ACCACTTCGC ACTGCCCGAC
CGCTCGGACG GCGGGACCCA GGCCGACTAC TTCGTGGACC ACGGCGGCGG CTGGGCGGGC
GACGGGATGA CGCTGCCCGG CGCGCTGGAC GTGGAGTACA ACCCGTACGG GGACACCTGC
TACGGCAAGG ACCAGGACTC GATGGCCGAG TGGGTGCGGC AGTTCAGCGG CAGGCTCGCC
GAGCGCACCG GGCGGCACGC GACGATCTAC ACGTCGACCA ACTGGTGGAA CCAGTGCGTG
GGCGACAAGC TGCGGCTGGG CGAGTCGAAC CCGCTGTGGG TCGCGCACTA CACCGACCAG
CTGGGGCAGC TGCCGAGCGG CTGGGACTAC CAGACGTTCT GGCAGTGGCA GGCCGCCGGG
CAGTTCCCCG GCGACCAGAA CCTGTTCAAC GGCGACGCGG GCCAGCTGAC CAGGCTGGCA
TCGGGCTGA
 
Protein sequence
MTPEGRTRRW ATRWGLPTTA AAVLLAVAHT TALNAEPLPD EGAPEGSDQH YAGSEIAKRE 
GWAGARSSAA PDPTGKVPGM DVSSHQGDVD WGRPWGDGAR FAYVKATEGT GYTNPHFQQQ
YEGSRGVGMV RGAYHFALPD RSDGGTQADY FVDHGGGWAG DGMTLPGALD VEYNPYGDTC
YGKDQDSMAE WVRQFSGRLA ERTGRHATIY TSTNWWNQCV GDKLRLGESN PLWVAHYTDQ
LGQLPSGWDY QTFWQWQAAG QFPGDQNLFN GDAGQLTRLA SG