Gene Amir_6870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6870 
Symbol 
ID8331090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8005343 
End bp8006374 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content77% 
IMG OID644947302 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003104512 
Protein GI256380852 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGACG GGGTGCGGGC GGCGTGGGCG GTTCCCGGTG AGCCCGACCG GTGCGCGGTG 
GTCGGGCTGG ACGCGGTCGA GCGGGTCGGC GAGGTGCTGG TGGCCGGGCG CTTGGCCGGG
GTGTGCGCGA CCGACGTGGA GATCGTGCGG GACGGGTTCG GGTGGCTCCC GCCCGGTCGG
GACGGGCTGG TGCTGTTCCA CGAGTCGCTC GGCGAGGTGC TGAGCGCGCC CGACGGCTCC
GGGTTCGCGC CCGGCGACCT GGTGGCCGGG GTGGTGCGGC GGCCGGACCC CGAGCCGTGC
GCGGCGTGCG CGGCCGACGC GTGGGACTTC TGCCGCAACG GGCGCTACCG CGAGCGCGGC
ATCAAGGAGC TGGACGGGTA CGGGGCGCAG CGCTGGAGCG TGCCGCCCCG GTTCGCCGTC
AAGCTCGACC CGGCGCTCGG CGACGCGGGC GTGCTGCTGG AACCGGCGTC GGTGGTGGCG
AAGGCGTGGG CGCAGGCGGA GCTGCTGTGC TCCCGCGCGT TCGTGCCCGC CCGCACCGCG
CTCGTGGTCG GCGCGGGTCC CATCGGGCTG CTGGCGGCGC TGCTGGGCGT GCAGCGCGGG
TACGACGTGC ACGTGGTGGA CCGGGTGGCC GACGGGGTGA AGCCGGACCT GGTGCGGGCG
CTCGGCGCGA CCTACCACCG CTCGGTCCCG GACCGGGAGG TCGACGTGGC GATCGAGTGC
ACCGGGGTCG CCGAGCTGGC CTGGGAGTGC GCGCGGCGGG CGGCGGTGGT GGTGCTGGCG
GGCATCTCCG GGGAGCACGG CCCGGCGGCG CTGGACCGGT CCGTGCTGGA CGCCGCCGTG
CTCGGCAACC GGGCCTTGAT CGGCACGGTC AACGCGGGCC CCGACGACTA CCGCGAGGCC
GCCGCCGCGC TCGCAGGCGC CGACCTCGGC TGGTTGCGCG GCCTGATCAC CCGCCGGGTG
CCGCTGGAGC GGTTCACCGA GGCGTTCGAC CGGGCCGACG GCGACGTGAA GGTGGTCGTC
GACCTGGCCT GA
 
Protein sequence
MADGVRAAWA VPGEPDRCAV VGLDAVERVG EVLVAGRLAG VCATDVEIVR DGFGWLPPGR 
DGLVLFHESL GEVLSAPDGS GFAPGDLVAG VVRRPDPEPC AACAADAWDF CRNGRYRERG
IKELDGYGAQ RWSVPPRFAV KLDPALGDAG VLLEPASVVA KAWAQAELLC SRAFVPARTA
LVVGAGPIGL LAALLGVQRG YDVHVVDRVA DGVKPDLVRA LGATYHRSVP DREVDVAIEC
TGVAELAWEC ARRAAVVVLA GISGEHGPAA LDRSVLDAAV LGNRALIGTV NAGPDDYREA
AAALAGADLG WLRGLITRRV PLERFTEAFD RADGDVKVVV DLA