Gene Amir_6862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6862 
Symbol 
ID8331082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7998543 
End bp8000507 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content74% 
IMG OID644947294 
Productprotein of unknown function DUF1023 
Protein accessionYP_003104504 
Protein GI256380844 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGATC CCGAGGTGCT CTACGGGAAG TTGGCGTCCG GGAGCGCGAG CGCGGTGGCC 
GCCGCGGGCG ACCCGCTGAC CGGCGCGTCG AGCGCGCTGT CGCGGGCGGG CGACGCGGTG
CGGTCGGGCG GGTCGACGGC CACGTCGGCG TGGCGCGGCA CGTCGGCGAC CGGGTTCGGC
AAGCGGGCGG ACCTGTCGGC GCGGGCGGCC GGGGTCGCGC GGGAGCGGCT CGGAACGGGC
GTCGAGGTGA TCCGGGCGGC TGCCGAGGCG TACTCGCAGA TGCGCGTCGG GGCGGACCAG
GTGATCGCGC AGTGGCGCGC CCGGTCGCCC CTGATGACGC CCGCCGAGAT GCTCAACCTC
GCCGGTCAGG TGAACCAGGC GCTCGACGGG GTGAAGAACG GTTACGAGAA GGTGCTGCGC
GAGTACGCGA GCGCCCTCGG GAAGGTGAAG CCGGGCTTCG GCGAGGTGGC TTCCGGTGAC
GCCGGGTGGG GGACGGCCGT GGCGGCCGTG CGCTCGCCTC AGGTGCCCGC GCCGGGCAGC
GACCCGAAGC AGGTGGCGGC CTGGTGGAAG GGGCTGTCGC AGGAGCAGCG GGACGAGCTG
CTGCGGACGA GGTTCCAGGA GCTGGGGCAG CTGCGCGGAC TGCCGTCCGA GGTGCTGGAC
CAGGCCAACC GGTCGCGCAT CGCCGACGAC GCGCAGCGGT TCGGCGCGGA GCGCGACCGG
CTCGACACCG CGATGGAGCA GCGGGCGCGG GAGCTGGGGA TCGACCCGTC GACGTCGGAC
GGGCTGACCA GGCTGCTGAA CGACCCCGAG TACGCGCGGA TGATGGACGA GCGGCGGGTC
GCGGCGCAGA AGGCGGACAA CGCGGCGGCG GTGCAGGAGA GCCTGACCAA GGCCGAGGAC
CTGGCCAAGA AGAACGGCTG GTTCAACGAG CAGGGCAAGG CCGACGTGCG CGTGCTCGCC
TGGGACCCGT ACGGCCCGCG CGGTGACGGC GCCACCGCGT TCGCGTACGG CAACCCGGAC
ACGGCCAAGA ACCTGGCGGT GGCCGTGCCG GGCACCGGGT CGACGCTCGA CGGCTTCTCC
GTGGAGCAGG CGGGGAACCT GCGCCAGGCG ATGGGCGCGG ACGGCAACGC CACGATCCAG
TGGCTCGGCT ACGACGCGCC CGGCTGGGCG ATCGGCGAGG TCGACAACCC GGCCCAGGCG
CGCGAGGGCG GGCTGAACCT GGTCGCGGAC GTGGACGGCT ACCGCGCCGC CGCCGAGGCC
GCGGGCAACA AGCAGCACCT GACGGTGATC GGGCACTCCT ACGGCTCCAC CACGGTCGGC
CACGCGGGCA TGAACGGGCT GAAGGCGGAC GACATCGCGT TCGTCGGCTC GCCCGGCGTG
GGCGCGTCGA ACGCGAACCA GCTCTCGGTG GGCCCCGGCC ACGTCTACGC GGGCGCGACC
GAGCACGACC CGGTGGTCCA GGGCACGAGC TCGACGTGGT TCACCGAGGA CGGCTCGTCC
ACCGGCCCCT ACGACAAGGG CTTCGGTGCC ACGATCTTCG GCACCAGCGA CTCCAAGAAC
CTGGTCGGCG CGCACACCCA GTACTACGAC CAGGGCTCGG AGTCGATCCA GAACCTGGCG
CGGATCGCCA ACGGCGACGG CGGTTCGGTG ACCTCGCAGA AGTGGCACGA CAACCCGCTC
GGCCCGTCGC TACCCGGCTC GGACCTGCCG GTCGTGGGGC CCGTGGTGGA CGCGGTCGGC
AACACGGCCG TGGGCGCGGC GGACCTGGTG ATCGACGCGG GCAGCGGCCT GTGGGACGCC
GGGAGCGCCG CCGTGGACGG CCGCTGGGGC GACGCGGGCC GGGGCGTGCT GGACACGGCG
GGCGAGGTGC TCAACGACGC GGGCGACATC GTGGTCAACG GGGTCGGCGA CGCCGTCGAG
CTCGGCAAGG ACGTCTGGGA CAACACCCTG GGCGCCTTGT TCTAG
 
Protein sequence
MIDPEVLYGK LASGSASAVA AAGDPLTGAS SALSRAGDAV RSGGSTATSA WRGTSATGFG 
KRADLSARAA GVARERLGTG VEVIRAAAEA YSQMRVGADQ VIAQWRARSP LMTPAEMLNL
AGQVNQALDG VKNGYEKVLR EYASALGKVK PGFGEVASGD AGWGTAVAAV RSPQVPAPGS
DPKQVAAWWK GLSQEQRDEL LRTRFQELGQ LRGLPSEVLD QANRSRIADD AQRFGAERDR
LDTAMEQRAR ELGIDPSTSD GLTRLLNDPE YARMMDERRV AAQKADNAAA VQESLTKAED
LAKKNGWFNE QGKADVRVLA WDPYGPRGDG ATAFAYGNPD TAKNLAVAVP GTGSTLDGFS
VEQAGNLRQA MGADGNATIQ WLGYDAPGWA IGEVDNPAQA REGGLNLVAD VDGYRAAAEA
AGNKQHLTVI GHSYGSTTVG HAGMNGLKAD DIAFVGSPGV GASNANQLSV GPGHVYAGAT
EHDPVVQGTS STWFTEDGSS TGPYDKGFGA TIFGTSDSKN LVGAHTQYYD QGSESIQNLA
RIANGDGGSV TSQKWHDNPL GPSLPGSDLP VVGPVVDAVG NTAVGAADLV IDAGSGLWDA
GSAAVDGRWG DAGRGVLDTA GEVLNDAGDI VVNGVGDAVE LGKDVWDNTL GALF