| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6846 |
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| Symbol | |
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| ID | 8331066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7981923 |
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| End bp | 7983773 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644947278 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_003104488 |
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| Protein GI | 256380828 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3962] Acetolactate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.243842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCTCA CCACCGCGCA GGCACTGGTC CGCTGGCTGC TCGCCCAACG CACCGAGCTG
CTCGACGGGA CCGAGGCCCC GCTGTTCCCC GGCGTCTTCG CGATCCTCGG CCACGGCAAC
GCGCTCGGCC TGGGCACCGC GCTGGAGGAG GTCCGGGACC GCCTGCCGGT GTGGCGCGGG
CACACCGAGC AGGGCATGGC GCTGGCCGCC ACCGCGATCG CCAGGGCGAC CCACCGCCGC
CAGGTCGGCG TGGTCACCAC CTCCCTCGGC CCCGGCGCGC TCAACGCCGT CACGGCGGCG
GGCGTGGCCC ACGCCAACCG CCTCCCGCTG CTGCTGCTCC CCGGCGACAC CTTCACCGGC
CGCGCCCCCG ACCCGGTGCT CCAGCAGGTC GAGCACTTCC ACGACCCGAC CACCACGGCG
AACGACGCCT TCCGCCCGGT CGCCCGCTAC TTCGACCGGA TCACCCGCCC CGAGCAGCTG
ATCGCCACCC TGCCGCAGCT CGCCCGCGCG CTGACCGACC CGGCCGACTG CGGCCCCGCC
GTCCTGGCGC TGCCGCAGGA CGCGCAGGTC GAGGAGCACG ACTTCCCGGA CCCGCTGTTC
GAGCCGGTCC TGCACCGCCC GCTCCGCCCG CGCCCCGACC GCGTCGAGCT GGCCTCGGCG
GCCGGGGCGC TGTCCCGGTC CACCCGCCCG CTGCTGGTGC TGGGCGGGGG CGTCCGCTAC
TCCGGCGCGG CGGCCGAGGC GCTCGCGCTC GCGGAGCGCC ACGGCGTCCC GGTCACCGAG
ACCACGGCGG GCCGCACCCT CGTCCCGCAC GACCACCCGC TGCACGCCGG TCCGCTGGGC
ATCACCGGTT CGGCGTCCGC GAACCGGCTG GCCGCCGACG CCGACGCCGT CCTCGCGGTC
GGCACCCGCC TGCAGGACTT CACCACCGCC TCCTGGACGG CCTTCGCCCT CACGGCCGCG
CTGGTCAACG TCAACACCGC CCGCTTCGAC GCGGTCAAGC ACGGCGCGAC CGCCGTCACC
GGGGACGCCC TGGAGGCCCT GCGCGAGCTG GGCGGGGCGC TGGCGGGCTG GCGCGCGGAC
CCCGCGTGGA CCACGAGGGC GCGCGCCGAG CGCGAGGTGT GGGACGCCCG CGTCACCGCC
CTGCGCGCCC CGAGCCCCGG CCTGCCCACG TACGCGCAGG TCGTGGGCGT GGTCAACGAC
CTGTCCGAGG ACGGCGACTA CGCGCTGACC GCGTCGGGCG GCCTGCCGGG CGAGCTGGTC
GGCGGCTGGC GGGCGCGCGG CGGCGAGCCG GAGCTGGACG TCGAGTACGG CTTCTCCTGC
ATGGGCTACG AGCTGGCGGG CGCGTGGGGC GCGGCGATCG CGCGGGAGCG GGGCGTGGTG
ACCACCCTGC TGGGCGACGG CTCGTACCTG ATGCTGAACT CCGACCTGTT CTCCGCCGCG
TTCGCCGGGC ACGGGTTCGT GGCGGTGGTG TGCGACAACG GCGGCTACGC GGTGATCGAC
CGCCTCCAGC GCGACCAAGG CGCGCGGCCG TTCCACAACC TGTACGCGGA CGTCCGCACC
GGTCACGCCG ACCCGCCGTC GGTCGACTTC GCGGCCCACG CCGCCGCGCT GGGCTGCTCG
GTCCACCCCG CGCCGGACCT GGTCGCGCTG CCGAACGCCT ACCGCGAGGC GAGGAGGGCG
GCGGTGGCCG GGAAGCGGCC CGCCGTGGTG GTGATCCGCA CCCACCCGTC GTCGTGGACG
CAGTCGGGCG CGTGGTGGGA GGTCGGCGTG CCCGAGTCCC TGGCGGGACG CCGGGACCAC
GTCGAGGGCA AGCGCCGCCA GGTCAGGCAC CTGGGGCGGG GGCACCGGTA G
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| Protein sequence | MRLTTAQALV RWLLAQRTEL LDGTEAPLFP GVFAILGHGN ALGLGTALEE VRDRLPVWRG
HTEQGMALAA TAIARATHRR QVGVVTTSLG PGALNAVTAA GVAHANRLPL LLLPGDTFTG
RAPDPVLQQV EHFHDPTTTA NDAFRPVARY FDRITRPEQL IATLPQLARA LTDPADCGPA
VLALPQDAQV EEHDFPDPLF EPVLHRPLRP RPDRVELASA AGALSRSTRP LLVLGGGVRY
SGAAAEALAL AERHGVPVTE TTAGRTLVPH DHPLHAGPLG ITGSASANRL AADADAVLAV
GTRLQDFTTA SWTAFALTAA LVNVNTARFD AVKHGATAVT GDALEALREL GGALAGWRAD
PAWTTRARAE REVWDARVTA LRAPSPGLPT YAQVVGVVND LSEDGDYALT ASGGLPGELV
GGWRARGGEP ELDVEYGFSC MGYELAGAWG AAIARERGVV TTLLGDGSYL MLNSDLFSAA
FAGHGFVAVV CDNGGYAVID RLQRDQGARP FHNLYADVRT GHADPPSVDF AAHAAALGCS
VHPAPDLVAL PNAYREARRA AVAGKRPAVV VIRTHPSSWT QSGAWWEVGV PESLAGRRDH
VEGKRRQVRH LGRGHR
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