Gene Amir_6780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6780 
Symbol 
ID8330996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7913148 
End bp7913615 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content73% 
IMG OID644947209 
Productprotein of unknown function DUF1470 
Protein accessionYP_003104423 
Protein GI256380763 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCTGC TGCTCGCTTT CCTGAACACC AGGGATCTGG AAATCGGCGC GGACGTGCTG 
GACGGCACAG CCGCGTGGCG CGCCTGGGTC AGCGAGCGGG GGCTAGGCGA CTCGGGGGAC 
CTGGTCGCCG TGCGTGCCGC CCGAACCGCC CTCCGGCGCT CGCTGGGGGA CCCGCACGAG 
GGCCCCGATC CCGCTATCGT CGCGACCATC GTCACCGTGG ACCTCAGCCA CGGCGTGCCG 
GTCCTGGCCA GCGCGGACGC GCTGGGCGCG GTCCTGGGCG CCGCCGCGAG GCTCGCGGTG 
CTCGGCTCGT GGGAGCGCTT CAAGATCTGC CCGGCGGAGA GCTGCCTGCG GGCCTTCTTC 
GACCGGTCCC GCAACAGGTC CCGCACGTGG TGCTCGATGC AGCTGTGCGG CAACCGGGAG 
AAGGCCAGGA ACTGGCGCGA GCGGCGCGCC CTCCAGGCGA TCACCTGA
 
Protein sequence
MELLLAFLNT RDLEIGADVL DGTAAWRAWV SERGLGDSGD LVAVRAARTA LRRSLGDPHE 
GPDPAIVATI VTVDLSHGVP VLASADALGA VLGAAARLAV LGSWERFKIC PAESCLRAFF 
DRSRNRSRTW CSMQLCGNRE KARNWRERRA LQAIT