| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6744 |
|---|
| Symbol | |
|---|
| ID | 8330960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7877468 |
|---|
| End bp | 7878274 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 644947173 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_003104387 |
|---|
| Protein GI | 256380727 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.91236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGTTCT CCCAGGCCAG CGCCGTCCGC CCGCTGGGCG ACGGCACCTA CACCGCGGCG
CTGCCCGCGG AGTGGACCAC CGGCCAGTCC CCGCACGGCG GCTTCCTGCT GGCCGTGCTG
GCCCGCGCCG CCGCCCACGC CGCGACCGCG CCGGGCGCCC AGCCCGCCCC GGCGCCGCTG
GCGGTCTCGG CCCAGTTCCT GCGCGCCGCC GAGGTGGGCC CCGTCCTGAT CCGCACCTCG
GTCCGCAGGG CGGGCCGGGC GGCGGCGGTG GTGACGTGCG CGCTGGAGCA GCGCGGCCAG
ACCTGCGTGG AGGCCGCCGT GACGGTGGGC GCCCCGCCCA CGTCGGTGGA GTACGCGGAC
CTGCCGGACC TGGCCGCGTC GCCCCCGCAG GACGCGGTGG ACGTGTCCGC GCTGGCCCCG
GAGGGCGGCC TGCGCCTGGC GGGCGCGTGC GAGCTGCGCC TGGACCCGGT CAGCGCAGGC
TTCCTGCGCG GCCGGGCCGC GGGCCCGCTC CTGCTGCGCC TGTGGGCGCG CCCGCTGGCC
GAGCAGCCGG ACCCGTACTT CGCCCTGGTC ACCGGCGATG TCCCGGTGCC CGTGACGGTC
AACCTGGGCA GGCGGGGCTG GTCCCCCGCG GTGCAGCTGA CCGCGCTGGT CCGCTCGGTG
CCCGCCGCAG GCGGCTGGCT GCGCCTGCAG GTGACCTGCC GCGCCGTGCA CGGCCAGTGG
TACGACGAGG ACGTGGTGGT CGTCGACGCC GCAGGCAAGC TGGTCCTCCA GTCCCGCAAA
CTGGCACTCA CCCCACCCCC CGCCTGA
|
|---|
| Protein sequence | MQFSQASAVR PLGDGTYTAA LPAEWTTGQS PHGGFLLAVL ARAAAHAATA PGAQPAPAPL
AVSAQFLRAA EVGPVLIRTS VRRAGRAAAV VTCALEQRGQ TCVEAAVTVG APPTSVEYAD
LPDLAASPPQ DAVDVSALAP EGGLRLAGAC ELRLDPVSAG FLRGRAAGPL LLRLWARPLA
EQPDPYFALV TGDVPVPVTV NLGRRGWSPA VQLTALVRSV PAAGGWLRLQ VTCRAVHGQW
YDEDVVVVDA AGKLVLQSRK LALTPPPA
|
|---|
| |