| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6494 |
|---|
| Symbol | |
|---|
| ID | 8330706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7628404 |
|---|
| End bp | 7632021 |
|---|
| Gene Length | 3618 bp |
|---|
| Protein Length | 1205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644946923 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003104141 |
|---|
| Protein GI | 256380481 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.226417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCACG TGTCCGAGCC CAAGCCGTTG AACCCGACCG AGCAGGACGC GCTGGTCAAG
CAGATCGGCC TCACCCTGAT GCGCGCCGCG CCTGAGGAGT GGCGGCACGT CACCGCGGAC
TACCGCGCGA CCGGTCGGTA CTTCGAGCTG GCCGCCGAGG TCCGCGGGGC CGACGGTTCC
GCGCGCACCT GGTCGCCACC GCAGGAGGTG GCGCAGCTCT TCGCGCGCCT GCGCGCGGGC
ATGTACCGGG AGGGCCGGGG GAGCTGGTCC AACGCGCGCT ACCAGCTCGA CCACCCGTCG
AGCTACAACC TCGACTTCGA CCGCGCCGAG CCCTCCTGGC AGAACCCGCC GCCGCAGCAG
GCCTACCTGG ACGAGGTGCG CTTCTTCCCG CGCACCGACG AGAACACGCC GGAGTGGCTG
CGGCGCAGGG TCAAGGACGC CGGTGGGGTT GGAGCCGGGG CCGGGGCGCC GGGTGCGCCG
CAGGGGGCTC CCGGTGGGGC GCAGGGGGCT GGCAAGCCTG CTGCTGCCGC CGCTGGTGCT
GGGGCTGGTG CTGGTGGAAG GGCTGGCGCG TCTGCTGCCG CTCCCGCCGG TGACCGGGCG
CCCGGTGGTG ATCGCGCGCC TGCCGGTGGT GAGGCGCGGT CCGGTGGGCA GCGGTTCCGC
AGCACCCGCG TGTTCGACGG CGCGGGCGCG GGCGGGCGGC CCACGGTCAA CCGGCCACCG
GTGTCCGACG CGGACCGCGA GCTGCTGCTG AACTACCTGG ACCGGGCGCC CGTCGTGGTC
GCCGGGCGCG GGTTCGACGC GGACGTGCTC GACCCGGACG TGCCGCAGGT CGTGCCGGTG
GCGTTCCAGA CGGACGGCAC GTGGATCTGG CCCGCCGCGG TCGCGTACTA CCTGCGTGGC
TACGGGGTTC CGCCCGAGGC CGAGCTGGTG TCGTGGGTCC GGGCGCACGA CTTCGTGCTG
CCGGAGGTGG CGGAGGAGAC CAGGCAGGCC GCCGCGGTGA CCCTCGGGGC CGCCGCCGCG
CCGCAGGGGA CGCCGCTGCC GAAGACGCCG GTGCAGGTCA AGCCGGTGGC GTCGGCGCTG
CAGGAGCAGG CCACGACGGT CGCGCCCCGG CCCGAGGTGT CGGGTGCGAA GGGTGGCAAG
GACGGCGGGG TCGGGGCTGG GGCTGGGGTC GGGGCTGGTG ACGGTGGCCG GGAGGCCGTC
GGGCAGTCCG GTCCTGGACA GCCTGGACAG GTTGGGCCTG GGCAGCCGGG CGCTGGACCG
CAGGGCGCCG GGCAGGCGGG CGTTGGGCAG GCGGGTGCTG GGCAGCCTGG GGCCCGTGGT
GGTGATCGGG TGCTGACCTT CGAGGAGGTC AAGCAGCAGA ACATCAACTA CGGGACGGGT
GGGCCGCCCT ACCGGGTCAC GTTCGAGGAG GAGGGGCCGG TCGCCGACGA TCGGCACCAG
CGCGAGTCCT ACGTGGACGG CATGGATCTC TTCGCGCCCG GTTCCTACGA GCGGGAGAAG
GCCGAGGAGA GCACCAAGGC CTGGAACCCG TTCGGCGAGG AGCCCGTCGA CGAGCCCGAG
CAGCCTGCTG CCGGTGCGAG CGCGGCGCGG GTCGAGGAGC CGGAGGACGA CGCCCCGCTC
GGGCGCGACG TGCGGGACGA GGCCGAGGAG CCCGTCGACG AGCCCGTCGG TGAGCCCGAG
GAGCGTCGGC CCGAGGAGCG TCGGGACGAC GAGCACGCGC GTGACCACGA GGTGGACGAG
CTGGGGCTCG GTGCGCTGAA GCCGAGCGAC ATCCGGGGCG CTGCGGCCGA GGAGGCCGAG
GAGGACGACG TCCGGCCTGA GGACGACGAG CCTGAGGAGC GCGTCTCTGA GGAGCGCGCC
TCAGAGGAGG TGGCCCGGTA CGAGTCGGCG CAGGCCACGC AGTACATGGC CCCGGTGGTT
CTGGGTGGTG GGCCCGGTGA CGGCCCGCGT GACCAGGACG AGGAGCACGA GGACGCGCGG
GCCGAGGTCG AGCCCGAGGT CGAGTCCGAG CGGTTCGACG ACCGGGACGG TGACCGGGAG
GACGAGCGGC GGCACGAGGA GCGGTTCGAG GACGAGCGTC CCGAGCCGTT CTCGGCGACC
GGGCCTGACC GGTTCGAGGC CACCACGCCG GACCGGTTCG AGGCGACCAG CCCGGAGCGG
TTCGACCGGG CCGAGGCCGA TCGGTTCGAG ACCGCCGAGC CCGAGCACTT CGAGGCGACC
AAGTCCGAGC GGTTCGAGGC CACGAGCCCC GAGCGGTTCG ACGCGCCCGA GCCCGAGCTG
TTCACCGCCA CCGAGCCGGA GCGGTTCGAG GCCATGGAGC CGGAGCGGTT CAACGCCACC
GAGCCGGAGC GGTTCGACGC CGCCGAGCGC GAGCGGTTCG AGGCCACGGA GCCGGAGCGG
TTCGAGGTGA CCAAGTCGGA CAGGTTCGAC GCGGTCGAGC CGGACCGGTT CGAGGCGACC
CGGCCCGAGC GGTTCGAGGC GACGAGCCCG GAGCGGTTCG AGGAAGCTGG GCGGTTCGAG
GAGGCCGGGC GGTTCGAGGA CGAGGACGGC GGGTTCGACG CCGAGCCGGT CCGGTCCGGG
AAGCCGCTGG CCGGGCCGCA GGCCACCCAG CACATCGACC CCGTCGCCCT GCTCGCGGAC
GAGCGGCCGG ACGAGCGGCC GGACGAGCGG GTCGATGAGC GGTCCGATGC GCGGGTCGGT
GAGAGGCTCG ATGAGCGGGC TGACGCGCGG GGCAGTGAGC GGGTTGAGGA GCCTCGGTTC
GAGGACGACT CCCGGACCAC GCCCACGCCC CTCGACTCCT CGGAGTTCGA GGACCGCCGG
GCCGAACCGG CGCGGGGCGT CACGCCGGAC GAGAACGACC ACCTGCGCGG CCTGCGCCAG
ACGCTGGCCG AGCTGAACGT GCCGCCCACG GCCTACCTGA TCGGCGACGA CCAGGTCGAC
CGCACGTGGG TGCTCCGGTT CGACGGGCGC CGCTGGGTGG TCGGCTGGTA CGACCAGGGC
CTCGCGCACC CGTCGACGTT CGACAAGGTC GAGGACGCCG GGTCGTTCCT GGTCGGCAAG
CTGGTGATGG CGGGGATGCG CGCGCCGCGA CCGCCGATCC CGCCCGGCCG CCAGCAGCCG
CCGCAGCAGC CCCGGCCGCC GATGGCGGGC AACGGGTTCC GGCCCGGACC GCCGCCGCCC
CCTCGGCCGG TCGAGCCGCA GGCCGAGGCG ACCCCGCCGA AGCCCGCGCC CGCCGCGTCC
CCGGCCCCGG CCGCCGCGGT TCGGGCGTGG CCGATCAACC CGATGAACGG CGAGCCGCCG
CTGACGCTGT TCCGGCACAA GCAGATGGTC GAGCTGCCCG CGGGCACCGA GGTCGACCGG
TACGGCAGCG GGGAGGGCAA CCTGGTCTAC AAGATCGGGA CGCCGTTCCC GCACCGGTCG
CTGGTGCCGT CGTGGATCAA CCGGCCGTAC CGGGCGTACC GGCTGCGGCG CAGCGTCGAG
GTGCTGACCG GGACCGCCGT GGCGTGGTTC GAGCAGCCCG GTGGCGGCAC GGCCTACCTG
CTGCCCAGGA CGATCGACGA CATGCTCGCC GACGGCGTGC TGGTCGAGGT CGCGGACCAG
GAGGCGCCCG TCCACTGA
|
|---|
| Protein sequence | MVHVSEPKPL NPTEQDALVK QIGLTLMRAA PEEWRHVTAD YRATGRYFEL AAEVRGADGS
ARTWSPPQEV AQLFARLRAG MYREGRGSWS NARYQLDHPS SYNLDFDRAE PSWQNPPPQQ
AYLDEVRFFP RTDENTPEWL RRRVKDAGGV GAGAGAPGAP QGAPGGAQGA GKPAAAAAGA
GAGAGGRAGA SAAAPAGDRA PGGDRAPAGG EARSGGQRFR STRVFDGAGA GGRPTVNRPP
VSDADRELLL NYLDRAPVVV AGRGFDADVL DPDVPQVVPV AFQTDGTWIW PAAVAYYLRG
YGVPPEAELV SWVRAHDFVL PEVAEETRQA AAVTLGAAAA PQGTPLPKTP VQVKPVASAL
QEQATTVAPR PEVSGAKGGK DGGVGAGAGV GAGDGGREAV GQSGPGQPGQ VGPGQPGAGP
QGAGQAGVGQ AGAGQPGARG GDRVLTFEEV KQQNINYGTG GPPYRVTFEE EGPVADDRHQ
RESYVDGMDL FAPGSYEREK AEESTKAWNP FGEEPVDEPE QPAAGASAAR VEEPEDDAPL
GRDVRDEAEE PVDEPVGEPE ERRPEERRDD EHARDHEVDE LGLGALKPSD IRGAAAEEAE
EDDVRPEDDE PEERVSEERA SEEVARYESA QATQYMAPVV LGGGPGDGPR DQDEEHEDAR
AEVEPEVESE RFDDRDGDRE DERRHEERFE DERPEPFSAT GPDRFEATTP DRFEATSPER
FDRAEADRFE TAEPEHFEAT KSERFEATSP ERFDAPEPEL FTATEPERFE AMEPERFNAT
EPERFDAAER ERFEATEPER FEVTKSDRFD AVEPDRFEAT RPERFEATSP ERFEEAGRFE
EAGRFEDEDG GFDAEPVRSG KPLAGPQATQ HIDPVALLAD ERPDERPDER VDERSDARVG
ERLDERADAR GSERVEEPRF EDDSRTTPTP LDSSEFEDRR AEPARGVTPD ENDHLRGLRQ
TLAELNVPPT AYLIGDDQVD RTWVLRFDGR RWVVGWYDQG LAHPSTFDKV EDAGSFLVGK
LVMAGMRAPR PPIPPGRQQP PQQPRPPMAG NGFRPGPPPP PRPVEPQAEA TPPKPAPAAS
PAPAAAVRAW PINPMNGEPP LTLFRHKQMV ELPAGTEVDR YGSGEGNLVY KIGTPFPHRS
LVPSWINRPY RAYRLRRSVE VLTGTAVAWF EQPGGGTAYL LPRTIDDMLA DGVLVEVADQ
EAPVH
|
|---|
| |