Gene Amir_6428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6428 
Symbol 
ID8330639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7524033 
End bp7524686 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content70% 
IMG OID644946856 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003104075 
Protein GI256380415 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTACC ACGCTGACCA GAGGCTTTTT ATAACACCGT TGCGTTACGA TTCCCCGGTG 
CCAAGACCGA AGACCCACGA CGACGCCCTT CGCGTTCGGC TGCTCGACCG CGCGGGTGAA 
CTCCTGTCCA CCGAGGGGCC GGGCGCACTG AGCTTGCGCA GGCTCGCGGC GGATGTCAAC 
ACCTCGACCA CAGCGGTGTA CTCGCTGTTC GGGGGCAAGC CCGCGCTGTT GGACGCGTTG 
TACGAAGAGG GGTTCCGCCG TTACGAGCAG AGGCTTGCCT CCGTGCCGGG GACGGACGAC 
CCGGTGGAGG ACATCACGCG GATCGGCCGG GCCTACCGGG AGCACGCGCT GGCGGACCCG 
CACTTCTACC TGGTGATGTT CAGCAGCCGG TCCACGCTGG ACTTCCAGCC GTCGGCGGGG 
GTCGCGGAGC TGGCGCGGGG GACGTTCCAG CCGGTGCTCG GCGCGGTGGA GCGGGCGGTG 
CGCGACGGGG TGTTCGTGGA CGAGGAGCCG GGGCAGTTGG CGCTGGCGCT GTGGGGGTTG 
GTGCACGGGC TGATCTCGCT GGAGCTGAAC GCGGCGCTGC CCGCGGGGCT CGCGGTGGGG 
GCGGTGTACG AGCGGGCGGT GCGCGCGCAG TGCGAGGGGT GGCGGCGGCG GTAG
 
Protein sequence
MWYHADQRLF ITPLRYDSPV PRPKTHDDAL RVRLLDRAGE LLSTEGPGAL SLRRLAADVN 
TSTTAVYSLF GGKPALLDAL YEEGFRRYEQ RLASVPGTDD PVEDITRIGR AYREHALADP 
HFYLVMFSSR STLDFQPSAG VAELARGTFQ PVLGAVERAV RDGVFVDEEP GQLALALWGL 
VHGLISLELN AALPAGLAVG AVYERAVRAQ CEGWRRR