| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6414 |
|---|
| Symbol | |
|---|
| ID | 8330625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7508949 |
|---|
| End bp | 7510220 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644946842 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003104061 |
|---|
| Protein GI | 256380401 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.820069 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGATCC TCGACTCGCG TCCCGAACTG CCGAGTGAGA AGGGTTCCGA AGTGCTGCTG
ACCGAGCGTG GGGTCAGCAT TGCCCCTGTG GACGACCTGG GTGAGGGCCG AGGCCCCTCG
TGGCTGGACG ACTGGCTGTC GGCGAACGGG TCCGAGGTCA TCGCCTGGCG GCGGCACATC
CACGCCCACC CGGAGCTGTC CCGCAAGGAG TACCGCACCA CCGAGCTGAT CGGCGACGTG
CTGCGCTCGG CCGGGCTCAA GCCCAGGGTG CTGCCCGGCG GCACCGGCCT GGTGTGCGAC
GTGGGCAGCG GCCCCCGGTG CGTGGCGCTG CGCGCCGACA TCGACGCCCT GCCGCTGCGC
GAGAACACCG GCGCGCCGTA CGCGTCCAAG GTCGACGGGG TCTCCCACGC GTGCGGCCAC
GACGCGCACA CGACGGTGCT GCTGGGCGCG GCGCTGGCGC TGGCGTCGGC CACCGAGCTG
CCCGGCCGGG TGCGGCTGGT GTTCCAGCCC GCCGAGGAGA TCATGCCCGG CGGCGCGCTC
GACGTGCTCG CGGCAGGCGG CCTCGACGGG GTCGAGCGGA TCTTCGGCCT GCACTGCGAC
CCCCGGCTCC AGGCCGGGCG CATCGGCACC AGGGTCGGCG CGATCACGTC CGCGTCGGAC
CTGCTGGAGC TGCGCCTGAC CTCCCCCGGC GGCCACACCT CCCGCCCGCA CCTGACCGCC
GACCTGGTGC ACGCGCTCGG CACGGTGATC ACCGGGCTGC CGACGCTGCT GTCGCGCCGG
GTCGACCCGA GGTCCGGCAC GGTGCTCGTG TGGGGCGCGG TGCACGCCGG CGAGGCGGCC
AACGCGGTGC CGCAGGACGG CGTGCTGCGC GGGACCCTGC GCACCGGCGA CCGGGACATC
TGGGCCGAGC TGGAGCCGCT GGTCAAGGAG CTGGTGTCGT CCCTGCTGGC CCCGCTGGGC
GTCGGCTTCG ACCTGCACCA CCGCAGGGGC GTGCCGCCCG TGGTGAACGA CCGCGAGTCG
ACCATGCTGC TGCGCGCGGG CATCGAGGCC GCGCTGGGCG AGGACGCGCT GGCGGGCACC
CAGCAGTCGT CGGGCGGCGA GGACTTCGGC TGGTACCTGG AGCACGTGCC GGGCTCGTTC
GCGCGCCTGG GCGTGTGGGA CGGCGAGGAG CCCCCGCGCG ACCTGCACCA GCCGACGTTC
AACCTGGACG AGCGGGCGCT GATGGTCGGC GTGCGCGTCA TGGTGCACAC GGCGCTGGCC
GCGCTGGCGT AG
|
|---|
| Protein sequence | MTILDSRPEL PSEKGSEVLL TERGVSIAPV DDLGEGRGPS WLDDWLSANG SEVIAWRRHI
HAHPELSRKE YRTTELIGDV LRSAGLKPRV LPGGTGLVCD VGSGPRCVAL RADIDALPLR
ENTGAPYASK VDGVSHACGH DAHTTVLLGA ALALASATEL PGRVRLVFQP AEEIMPGGAL
DVLAAGGLDG VERIFGLHCD PRLQAGRIGT RVGAITSASD LLELRLTSPG GHTSRPHLTA
DLVHALGTVI TGLPTLLSRR VDPRSGTVLV WGAVHAGEAA NAVPQDGVLR GTLRTGDRDI
WAELEPLVKE LVSSLLAPLG VGFDLHHRRG VPPVVNDRES TMLLRAGIEA ALGEDALAGT
QQSSGGEDFG WYLEHVPGSF ARLGVWDGEE PPRDLHQPTF NLDERALMVG VRVMVHTALA
ALA
|
|---|
| |