Gene Amir_6404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6404 
Symbol 
ID8330615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7497229 
End bp7498632 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content73% 
IMG OID644946832 
Productflavoprotein disulfide reductase 
Protein accessionYP_003104051 
Protein GI256380391 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCGCA TCGTCATCAT GGGCGGTGGG CCCGCTGGGT ACGAGGCGGC GCTGGTCGCG 
GCTCAGCACG GCGCGGACGT GACCGTCATC GAGCGCGAGG GCCTCGGTGG CGCGTGCGTG
CTGTACGACT GCGTGCCGTC GAAGGCGTTC ATCGCCTCCG CCGCCAGTCG GTCGGCGTTC
CGCAGCGCGG GTGAGCTGGG CATCCGGACG GACGACACCG AGGCGGCGGT CGAGCTCCCC
GTCGTGCACG GTCGGGTGAA GGGCTTGGCG CTGGCGCAGT CCGCGGACGT GCGGGCGAGG
CTCCAGCGCG AGGGCGTGCG GATCATCATC GGCGACGCCG AGTTCCGCGA CGACGAGCGC
GGTCTGGCGC AGCACCGGGT GCTGGCGCGG ACCGAGGACG GGGCCGAGGA GGTGCTGGAG
GCGGACGTCG TGCTGATCGC CACCGGCGCC ACCCCGAGGG TGCTGCCCGG CGCGGAGCCG
GACGGCGAGC GGGTGCTGAA CTGGCGGCAG CTGTACGACC TGCCGGAGCT GCCGGAGCAC
CTGGCGGTGA TCGGTTCGGG CGTGACGGGC GTGGAGTTCG CGTCGGCGTA CACCGAGCTG
GGCGTGAAGG TCACCATGGT GTCGAGCCGG GACCGCGTCC TGCCGCACGA GGACGCCGAC
GCGGCGGCCG TGCTGGAGGA CGTGTTCGCC GAGCGCGGGA CCGCCGTGGT GAAGCACGCG
CGCGCGGACC GGGTGGAGAA CACCGGCGAC GGCGTGCGGA TCCACCTGGC GGACGGCCGC
GTGGTCGAGG CGAGCCACGC CCTGATGACC GTCGGCTCGG TCCCGAACAC CGAGGGCCTG
GGCCTGGACC GGATCGGCGT CGAGCTGGGC AAGGGCGGGT ACATCCCGGT GGACCGGGTC
TCGCGCACGA CGGTGCCGGG CGTGTACGCG GCGGGCGACT GCACGGGCGT GCTGCTGCTG
GCGTCGGTCG CGGCGATGCA GGGCCGGATC GCGATGTGGC ACGCGCTGGG CGAGGGCGTG
AGCCCGATCA AGCTGAAGAC CGTCGCGGCG AACGTGTTCA CGAACCCGGA GATCGCCACG
GTCGGCATCA GCCAGCAGGC GATCGACTCC GGCGAGGTCC CGGCCCGAAC CGTCATGCTG
CCCCTGGCGA CCAACCCGAG GGCCAAGATG GAGGGCCTGC GCCGCGGCTT CGTGAAGCTC
TTCTGCCGCC CGGCGACCGG CGTGGTGATC GGCGGCGTGG TCGTGGGCCC GACGGCGAGC
GAGCTGATCC TGCCGATCGC GCTGGCGGTG CAGAACCAGC TGACCGTGGA GGACCTGGCG
ACGACGTTCT CGGTGTACCC GTCGCTGACG GGCTCGATCA CCGAGGCCGG CCGGCAGCTG
ATGCGGCACG ACGACCTGGA CTGA
 
Protein sequence
MTRIVIMGGG PAGYEAALVA AQHGADVTVI EREGLGGACV LYDCVPSKAF IASAASRSAF 
RSAGELGIRT DDTEAAVELP VVHGRVKGLA LAQSADVRAR LQREGVRIII GDAEFRDDER
GLAQHRVLAR TEDGAEEVLE ADVVLIATGA TPRVLPGAEP DGERVLNWRQ LYDLPELPEH
LAVIGSGVTG VEFASAYTEL GVKVTMVSSR DRVLPHEDAD AAAVLEDVFA ERGTAVVKHA
RADRVENTGD GVRIHLADGR VVEASHALMT VGSVPNTEGL GLDRIGVELG KGGYIPVDRV
SRTTVPGVYA AGDCTGVLLL ASVAAMQGRI AMWHALGEGV SPIKLKTVAA NVFTNPEIAT
VGISQQAIDS GEVPARTVML PLATNPRAKM EGLRRGFVKL FCRPATGVVI GGVVVGPTAS
ELILPIALAV QNQLTVEDLA TTFSVYPSLT GSITEAGRQL MRHDDLD