Gene Amir_6378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6378 
Symbol 
ID8330589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7471237 
End bp7471791 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content66% 
IMG OID644946806 
ProductGtrA family protein 
Protein accessionYP_003104025 
Protein GI256380365 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGTCCG TACTGGAGAA CGCTGCCCAC CGGCTCCCCG AGCCGCTGCG GTCGCTCGCG 
CTCAAGCACC GTGAGTTGCT GAAGTTCGCG CTGGTCGGCG GGACCTGCTT CGTGATCGAC 
ACGGCGATCT TCTTCGCGCT GAAGTCGACG GTGCTGCTGG AGAAGCCGGT CACCGCGAAG 
ATCGTGGCCA CGCTGGTGGC GACGATCGTG TCCTACGTGC TGAACCGCGA GTGGTCGTTC 
AAGACCAGGG GCGGGCGGGA GCGGCACCAC GAGGCGGCGC TGTTCTTCCT GGTCAACGGC 
ATCGGGATCG TGCTGAACTC GATGCCGCTG TGGGTCTCCC GCTACCTGTT CCACCTCCAG 
GAGCCGGAGG TCAGCAGGCT GGTGCAGGAG GTCTCGGACT TCGCCAGCGC CCAGATCATC 
GGCACGCTCA TCGGCATGGC GTTCCGCTGG TACGGGTACA AGAAGTGGGT TTTCCCCGAC 
GAGGGCGCCC GCACTCCCCG CGCGGAGCGG AAGTCGTACC CGTCGGCCGA GGATGAGAAC 
CTCGGGCATT CCTGA
 
Protein sequence
MVSVLENAAH RLPEPLRSLA LKHRELLKFA LVGGTCFVID TAIFFALKST VLLEKPVTAK 
IVATLVATIV SYVLNREWSF KTRGGRERHH EAALFFLVNG IGIVLNSMPL WVSRYLFHLQ 
EPEVSRLVQE VSDFASAQII GTLIGMAFRW YGYKKWVFPD EGARTPRAER KSYPSAEDEN 
LGHS