| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6340 |
|---|
| Symbol | |
|---|
| ID | 8330551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7433070 |
|---|
| End bp | 7434203 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644946769 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003103988 |
|---|
| Protein GI | 256380328 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGATCG ACGCCACCGC CGTCCCCGCG GATCGGGGCG GGGTCGGGAG GTACGTGGAC
TCGCTGGTCA CCGCGCTCGA CGCGGACGGC GCGGGCGTCA GCGTGGTGTG CCAGCCACGG
GACGCGTCCC ACTACCGCAG CCTGGCCCCG ACCTCCCGCG TGATCGCGGC GGCCGAGGCA
GTAGCCACCC GAACCGCCCG GCTCACCTGG GAGCAGGCCT CGCTGCCCAG GCTGGTAGCC
CGCCTGGGCG TGGACGTCGT GCACTCGCCG CACTACACCC TGCCGCTGGC CAGCAGAGCC
GCGTCCGTCG TGACCCTGCA CGACGCCACG TTCTTCACCG ACCCGGCGCT GCACTCCTCG
GTCAAGGCCC GCTTCTTCCG GGCCTGGACG CGGGCGTCCC TGCGCAGGGC GTCCCTGTGC
GTGGTCCCCA GCCACGCCAC CGCGGACGAG CTGGCCCGCG TAGCAGGCGC GGACCGCACA
GCCCTGCACA TAGCCCAGCA CGGCGTGGAC ACCGAACGCT TCCACCCACC TACCCCCCAG
CAGGTGGCGT CAGTCCGCGC CTCCCTGGGC CTGGGCGCCA CCCCGTACGT GGCCTTCCTG
GGCGCCCTGG AACCCCGCAA GAACGTCCCA GCCCTGATCC GGGGCTTCGC CAGGGCCTGC
CAAGGCCGCG CGGACCCCCC CGCCCTGGTC CTGGCAGGCC AACCGGGCTG GGACGGCCAG
GTGGAACGCG CCCTGGACTC GGTCCCGCAC CGAATCCGGG TGATCCGCGC CGGCTACCTC
CCCTTCGACG ACCTCGCCGG TTTCCTCGGC GGCGCAGAAC TGGTCGCCTA CCCCTCGCTG
GGCGAGGGCT TCGGCCTCCC AGTCCTGGAA GCCATGGCCT GCGGCGCAGC CGTCCTCACC
ACCCGCCGCC TGAGCCTCCC CGAGGTGGGC GGCGACGCCG TCGCCTACTG CGGCGTAGGC
GCAGGCGACA TCGCCGCGGC CCTGACGGCC CTCCTGGACG ACCCGTCCCG CAGACACGCC
CTCTCAACGG CAGCCCTGGT CCGGGCGAAG GACTTCTCCT GGGAAACGTC AGCAGCCCGC
CACCGCCTCG CCTACGCCCG AGCCGCACAC GCCCACCAGG CCACCAAACG CTGA
|
|---|
| Protein sequence | MLIDATAVPA DRGGVGRYVD SLVTALDADG AGVSVVCQPR DASHYRSLAP TSRVIAAAEA
VATRTARLTW EQASLPRLVA RLGVDVVHSP HYTLPLASRA ASVVTLHDAT FFTDPALHSS
VKARFFRAWT RASLRRASLC VVPSHATADE LARVAGADRT ALHIAQHGVD TERFHPPTPQ
QVASVRASLG LGATPYVAFL GALEPRKNVP ALIRGFARAC QGRADPPALV LAGQPGWDGQ
VERALDSVPH RIRVIRAGYL PFDDLAGFLG GAELVAYPSL GEGFGLPVLE AMACGAAVLT
TRRLSLPEVG GDAVAYCGVG AGDIAAALTA LLDDPSRRHA LSTAALVRAK DFSWETSAAR
HRLAYARAAH AHQATKR
|
|---|
| |