Gene Amir_6332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6332 
Symbol 
ID8330543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7424894 
End bp7425574 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID644946761 
Productpeptidase M50 
Protein accessionYP_003103980 
Protein GI256380320 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000444849 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCACCG TGTTCGATTC AGAGATCGCG GTCACCGCGG GCACCGTGCT GCTCGTCCTG 
GGCGGTTGGG CGGTGTCGCT GTGCCTGCAC GAGTTCGGCC ACGCCATGGT CGCCTACAAG 
GGCGGTGACT TCGAGGTCCG CGACAAGGGC TACCTGACGC TGGACATCCG CCGCTACACC 
GACCCGGTGC TGAGCCTGGT CCTGCCGCTG CTGCTGCTCG CCTTCGGCGG CATCCCGCTG 
CCCGGCGGCG CGGTGTGGAT CAACCACTAC GCGCTGCGCT CGCGGCGGGT CGAGTCGTGG 
GTGTCGCTGG CGGGCCCGCT GAGCAACCTG GTGCTCGGCC TGCTGCTCGC GCTGTCCGTG 
GTGCTGTTCG GCCCGCCGCT GCCCCTGGCC GCCGCCCTGT CCTACCTGGC GCTGCTCCAG 
GTGCTCGCGT TCACCCTGAA CATCCTGCCC ATCCCCGGCC TCGACGGCTG GGGCGCGATC 
GAACCGTGGC TGCCGCCGAA CGTGCGCGCG TTCGGCGCGA AGGCCCGCCC GTGGGCCCCG 
CTGGCGCTGT TCGCCGTCCT GATCGGTCTG CCCGCGCTCG CCCGGCCGTT CTTCGACCTC 
GCCTACTGGG TGTTCGGGCT GGTCGGCGGG GACGCGGTGC TCGCCTACTT CGGGCAGAGC 
ACCTTCCTGT TCTGGCGCTG A
 
Protein sequence
MLTVFDSEIA VTAGTVLLVL GGWAVSLCLH EFGHAMVAYK GGDFEVRDKG YLTLDIRRYT 
DPVLSLVLPL LLLAFGGIPL PGGAVWINHY ALRSRRVESW VSLAGPLSNL VLGLLLALSV 
VLFGPPLPLA AALSYLALLQ VLAFTLNILP IPGLDGWGAI EPWLPPNVRA FGAKARPWAP 
LALFAVLIGL PALARPFFDL AYWVFGLVGG DAVLAYFGQS TFLFWR