| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6267 |
|---|
| Symbol | |
|---|
| ID | 8330478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 7355768 |
|---|
| End bp | 7356547 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644946698 |
|---|
| Product | transcriptional regulator, IclR family |
|---|
| Protein accession | YP_003103917 |
|---|
| Protein GI | 256380257 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGGA GCAGCGACGT CCCGGCGCTG CGCCGGGGGC TCGCGGTGCT GCGCCTGCTG
GCGAGCAGGC CGGGGCCGCT GTCGGCGGCG GCGGTGGCGC GCGAGCTGGA CCTGCCGAGG
TCCACGACCT ACCACCTGCT GGCGGAGCTG GCCGACGCCG GGTTCGCCAC GCACTTCCCG
GAGGAGCGCC GCTACGGGCT CGGGGTGGCC GCGTTCGAGC TGGGCTCGGC GTACCTGCGG
CACGACCCCC TCGAACGCCT GGCGCGCCCG CTGCTGCGCA AGCTGGTGGA CCAGGTGTCG
CTGCCCGCGC ACCTGGGCGT GCTGCACGGC GCCGAGGCCC TCTACCTGGT GCGGGAGCAG
CCGAGGCAGC CGCAGACGAT CGTGTCGGAC GTCGGGGTCC GGCTGCCCGC GCACCTGACC
GCGTCGGGGA GGGCGATGCT GGCCCGGCTG CCGGACGCGC AGGTGCGGGC GCTGTTCCCG
AGCGCGCGGG CGTTCGTGGA CCGCACCGGC CGGGGCCCGC GCAACCTGCC CGCGCTGCGC
AGGCTGCTCA CCGGGGAGCG GCGGCGCGGC TGGGCGGTGG AGGACGGGTT CGTGACGGCC
GGCTTCGCGT CGGTGGCGGC CCCGGTCTAC GACCACGGCG AGCGCCCGAT CGCGGCGATC
ACGGTGACGT TCCGGCATTT GTGCGAGGAG CCGTGCGGCC AGTCCTGGCC GGAGCTGGCG
GCCGAGGCGA TGCAGACCGC CGACTCGCTC ACCGAGCGGA TCGGCGGGAG CCGGGCGTAG
|
|---|
| Protein sequence | MGGSSDVPAL RRGLAVLRLL ASRPGPLSAA AVARELDLPR STTYHLLAEL ADAGFATHFP
EERRYGLGVA AFELGSAYLR HDPLERLARP LLRKLVDQVS LPAHLGVLHG AEALYLVREQ
PRQPQTIVSD VGVRLPAHLT ASGRAMLARL PDAQVRALFP SARAFVDRTG RGPRNLPALR
RLLTGERRRG WAVEDGFVTA GFASVAAPVY DHGERPIAAI TVTFRHLCEE PCGQSWPELA
AEAMQTADSL TERIGGSRA
|
|---|
| |