| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6238 |
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| Symbol | |
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| ID | 8330449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7316946 |
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| End bp | 7318604 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644946669 |
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| Product | cellulose-binding family II |
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| Protein accession | YP_003103888 |
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| Protein GI | 256380228 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCA GAACGGGCGT GCTGCTCGCC GTCGCGGCTC TCGCCGCAGG TTCCTACGCG
TTGATCCCGT CCGCGAGCGC GGCCACGAAC CTCACGGCCA CCTTCGCCAA GACCCAGGAC
TGGGGCAGCG GCTTCGAGGC GAAGTTCACC GTCGCCAACG GCGGGTCGTC GGCCTCGAAC
AACTGGAAGA TCGAGTTCGA CCTGCCCTCC GGCACCACGG TCGGCTCCTT CTGGGACGCG
CAGGTCACCC GGAACGGCGA CCGCTACACG GCGACCAACC GGGACTGGAA CGCGGCGGTC
GGCGCGGGCT CCTCGGTGGC GTTCGGGTTC ATCGGCGCGG GCGGCGGCGC CCCCACGAAC
TGCACGATCA ACGGCGCCCC CTGCACCGGC ACCGGCACCG GCAACCCCGG CGACACGGCC
GCGCCGAGCG TCCCCGGCGG CCTGAAGGCC ACCGCCACCA CGGCCGACTC GGTCACGCTG
GCCTGGAACG CGTCGGCCGA CAACGTCGGC GTGGTCGCGT ACGACGTGTA CAAGGGCGGC
GACAAGGCCA CCACCGTCGC GAGCCCCACC GCGATCGTGT CCGGCCTGAC CGCCGACACC
TCGTACCAGT TCAGCGTCGT GGCGCGCGAC GCGGCGGGCA ACGCCTCGGC GAAGAGCCCG
GCGCTGACCG CGAAGACCGC GAAGAAGGCG GGCACCACCC CGGAGCCCTC GCCCGAGCCG
TCGCCGAACC CCAACCCCAC CCCGCAGCCG AGCCCGGACC CCACCCCGGA CCCGCAGCCG
TCCCCGGCGG GCGGGCGCGG CGCCCCCTAC CTGTTCCTGG GCTGGGGCAA CCCGCAGTCC
GCGACCGCGG TGATGCAGCA GACCGGCGTC AAGTGGTTCA CGATGGCGTT CATCCTGTCC
TCGGGCGGCT GCACCCCCTC GTGGGACGGC ACCCGACCGC TGACCGGCAG CGTGGACGAG
ACCACGATCA AGGCGATCCG CGCGGCGGGT GGTGACATCG TGCCGTCGTT CGGCGGCTGG
AGCGGCAACA AGCTCGGCCC GAACTGCTCG ACCCCCGAGG CCCTGGCGGG CGCGTACCAG
AAGGTCATCG ACGCCTACCA GCTCAAGGCG ATCGACATCG ACATCGAGAA CTCCGACGAG
TTCGAGAACG AGGTCGTGCA GGACCGCGTG CTGTCCGCGC TGAAGATCGT CAAGCAGAAG
AACCCGAACG TGCAGACCAT CGTCACGTTC GGCACCGGCA CCACCGGCCC GAACTTCTGG
GGCAACCGCC TCATCGAGCG GGCGGGCGCG CTGGACGCCA AGATCGACGT CTTCACGATC
ATGCCGTTCG ACTTCGGCAG CTCCAACATC GCGACCGACA CCATCAGCGC GGCCACCGGG
CTGAAGAACA AGGTGAAGTC GACCTTCGGG TACAGCGACG CCGACGCCTA CAAGCACATC
GGCATCTCGG GCATGAACGG CCTGTCCGAC CAGAAGGAGC TGACCACCGC CGCGGACTGG
ACCAAGATCC GCGACTGGTC GAAGAACAAC GGCCTCGGCC GCCTCGCGTT CTGGGCGGTC
AACCGGGACC GCGGCGGCTG CGACGGCCAG GTGTCGGCCA GCTGCTCAGG CATCTCGCAG
GCCGACCTGG AGTTCACCCG CATCACCGCG GGCTTCTGA
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| Protein sequence | MKTRTGVLLA VAALAAGSYA LIPSASAATN LTATFAKTQD WGSGFEAKFT VANGGSSASN
NWKIEFDLPS GTTVGSFWDA QVTRNGDRYT ATNRDWNAAV GAGSSVAFGF IGAGGGAPTN
CTINGAPCTG TGTGNPGDTA APSVPGGLKA TATTADSVTL AWNASADNVG VVAYDVYKGG
DKATTVASPT AIVSGLTADT SYQFSVVARD AAGNASAKSP ALTAKTAKKA GTTPEPSPEP
SPNPNPTPQP SPDPTPDPQP SPAGGRGAPY LFLGWGNPQS ATAVMQQTGV KWFTMAFILS
SGGCTPSWDG TRPLTGSVDE TTIKAIRAAG GDIVPSFGGW SGNKLGPNCS TPEALAGAYQ
KVIDAYQLKA IDIDIENSDE FENEVVQDRV LSALKIVKQK NPNVQTIVTF GTGTTGPNFW
GNRLIERAGA LDAKIDVFTI MPFDFGSSNI ATDTISAATG LKNKVKSTFG YSDADAYKHI
GISGMNGLSD QKELTTAADW TKIRDWSKNN GLGRLAFWAV NRDRGGCDGQ VSASCSGISQ
ADLEFTRITA GF
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