| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6221 |
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| Symbol | |
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| ID | 8330432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7292367 |
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| End bp | 7295162 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644946653 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003103872 |
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| Protein GI | 256380212 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGTGT GGGAAACTTT TCGCCGCACC GTGACGAAGC CGAAAGGTCT GCAGATGCGG
GTGAACCTGC TCGGCCCGGT TGAACTCGTC TCCGCAGGTG GGGACGCGGT CCACCTCGGC
GCGGCCAAGC GCAGGACGGT GCTCGCGGCG CTGGCGCTGG AGCTGAACCG GGTGGTGTCC
GGGGATCGCC TGCTGTCGCT GGTGTGGGAC GGCTCGCCGC CGCCGCAGGC CAAAGCGGCC
CTTCAGGGAC ATATCGCCCA GCTGCGGAAG GTGCTGGGCG GCGGTGTGGC GCTGGTCACC
CGCTCGCCGG GCTACCTGCT GACCGCCGAC CGGTCCGCCG TGGACGTGTT CCGGTTCGAG
GACCTGGTCG CGGGCTCGCG GGACGCGGAC GACGAGCGGG CGGCCGAGGA GCTGGCGCGG
GCGCTGCGGT TGTGGCGCGG ACCGGTGCTG GCGGACGTGG CGAGCGAGGT GCTGCGGGAG
TCGGTGTCGG CGCGGCTGGA GGAGCTGCGC ACGGTGGCCG TGCAGGAGCT GGCGACCCGG
CTGTTCCGGC TGGACCGGGC CGAGGAGGCG GTGGCGGCGC TGACCGGCGC GGTCGCCGAC
CACCCGCTGC GGGAGCCGCT GGTGGCCAGG CTGGTGCTCG CGCTGCACGG CGCGGGGCGG
CAGGCCGAGG CGCTGGAGCT GTTCCACCGC ACCCGCGAGC AGCTGGCCGA GGAGCTGGGC
GTCGATCCGG GACCCGAGCT GCGCGAGGCG TACCAGGCGG TGCTGGACGG CGGGGTCGTC
GCGACCCGGC CGGTGTCCGC GCCGCAGGTC AGCGCGCCCG CGCAGCTGCC GAGGGAGCAC
CGGGGGTTCG TCGGGCGGGC CTGCGAGCTG GCCGCGCTGG AGGCGGACCT GGGCGGGCAG
GACTCGGCGA TCGGGCTGCT GGTCGGTCCG GCCGGGGTGG GCAAGACGGC GCTGGCGCTG
CACTGGGCGC ACCGGGTGGC GGCGGACTTC CCGGACGGCC AGCTGTTCGT GAACCTGCGC
GGCTTCGACG AGACCGAGCC GCTGGACCCG CGCACCGCGC TGGTGGGGTT CCTGCGGGCG
CTGGGCGTGG ACGACTCGCA GATCGCGGTG GACCTGGAGG AGCAGGCCGC GCAGTTCCGG
TCGCTGGTGG CGGGCAGGCG GGTGCTGGTG GTGCTGGACA ACGCCAGGTC CGCGGAGCAG
GTCCGGCCGC TGCTGCCGGG GTCGGCGCGG TGCATGGTGC TGGTGACCAG CAGGTTGTTG
CTGGACGACC TGGTGGTGAC CGAGGGCGCG ACGTCGCTGC AGGTGCCGCA GCTGGAGGAG
GGCACGGCGG AGGACCTGCT GGCGGCGGCG CTGGGCAGGC ACCGGATCGA GCAGGAGCCC
GAGGCGGTGG CGGAGCTGGT CGAGCTGTGC GACCGGCTGC CGCTGGCGCT GCGGATCGCG
GGCGCGCGGC TGGCGTCCCG GCCGAGGTGG ACGATCCAGT CGCTGGTGGA CGAGCTGCGC
GACGAGCAGG GGCGGCTGTC GGGGCTGTCG CTGGAGGCGG GCACGGGCGT GCACGCGGCG
CTCGCGGTGA GCTACCGGGA GCTGCCGGAG GCGGCGGCAC GGCTGCTGCG GAGGTTGGGG
CTGCACCCCG GCACGGACCT GGACAGCTAC ACGGCGGCGG CGCTGATGGA CATCGGCGTG
GGCAGCGCGC GCACCCACCT GCGGACGCTG GCGTACGCGA ACCTGCTGCA CGAGTCCATG
CCGGACCGGT ACTCGCGGCA CGACCTGGTG CGGCTGTTCA CCCACCACCT GGCGGCGACC
GAGCCGGAGG AGGACAACAC CGAGGCCACG CACCGGCTGC TGGACTACTA CCTGCACGTG
GCGGACCTGG CGCGCGGGCA CCTGTCGGAC CACGTGCAGC CGTTCGAGCC GCTGAGCTAC
CAGCCGGCGA GCGCGCCGGA GCTGCGCTCG CACGAGGCGG CGCTGGGGTG GTTCACGCTG
GAGGAGGCGA ACCTCGGTCT GGCGCTGGAC ATCGCGGTCG GATCGGGGCT GCGGGAGCGG
ACGTGGCAGT TGGCGCTGTG CCTGGACGCG TTCCACTTCC GGCGCGGGAA CCGGCTGGAC
CGGTTGGCGC TGTGCGGGAT CGGGTTGACG GCGGCGCGGG CGCTGGGCGA CAAGCACGCG
GAGGCCACGT TCCTGCTGCG GCTGGGGTCG ACGCTGGCGG ACCTGGGGCG GATCGACGAG
GCGGTGGCGG CGTGCGGGGA GTCCGCGGCG CTGGCGATCG GGGACCGGCA TCTGGAGCTG
GCGGCGCTGG CGAACCTGGG GTACTGCCTG ATGGCGGCGG GGCGGTTGGC GGAGGCCGAG
GAGCGGATCA GGGAGACGGT GGAGATCGCG CGGGAGGTCG GGGACGCGCG GTCTCGGGCC
AGCGGGTTGA ACAACCTGGC GAACGTGCTG CTGGCTCGGG GGGAACCGGA GCTGGCGCTG
GGGCACGCGG TGGAGGCGCT GGGGTTGTTC AGCGGGGACT CGCCGACCAA GGCGCACACG
GCGACGTTGC ACACGGTGGG GGCGGTGCTG CAGGAGTTGG GGCGGCCTGA GGAGGCGTTG
GAGTCCTATC GGGCCGGGTT GGCGTTGGCC GAGGCCATTG GGGATCGGTA CCAGGAGGCT
TTGTGCCACC GGGCCATCGG GGATGTGCTG GAGCGGTTGG GGATGGCGGA GCAGGCGGTT
CCGCACTGGT CCGAGGCTTT GCGGCGGTAT CGGGATTTGC GGTTGACGGA GGGGGAGGAG
TTGAGCGGGA AGGTGGATGG GCCTGGGGGG GCGTAG
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| Protein sequence | MLVWETFRRT VTKPKGLQMR VNLLGPVELV SAGGDAVHLG AAKRRTVLAA LALELNRVVS
GDRLLSLVWD GSPPPQAKAA LQGHIAQLRK VLGGGVALVT RSPGYLLTAD RSAVDVFRFE
DLVAGSRDAD DERAAEELAR ALRLWRGPVL ADVASEVLRE SVSARLEELR TVAVQELATR
LFRLDRAEEA VAALTGAVAD HPLREPLVAR LVLALHGAGR QAEALELFHR TREQLAEELG
VDPGPELREA YQAVLDGGVV ATRPVSAPQV SAPAQLPREH RGFVGRACEL AALEADLGGQ
DSAIGLLVGP AGVGKTALAL HWAHRVAADF PDGQLFVNLR GFDETEPLDP RTALVGFLRA
LGVDDSQIAV DLEEQAAQFR SLVAGRRVLV VLDNARSAEQ VRPLLPGSAR CMVLVTSRLL
LDDLVVTEGA TSLQVPQLEE GTAEDLLAAA LGRHRIEQEP EAVAELVELC DRLPLALRIA
GARLASRPRW TIQSLVDELR DEQGRLSGLS LEAGTGVHAA LAVSYRELPE AAARLLRRLG
LHPGTDLDSY TAAALMDIGV GSARTHLRTL AYANLLHESM PDRYSRHDLV RLFTHHLAAT
EPEEDNTEAT HRLLDYYLHV ADLARGHLSD HVQPFEPLSY QPASAPELRS HEAALGWFTL
EEANLGLALD IAVGSGLRER TWQLALCLDA FHFRRGNRLD RLALCGIGLT AARALGDKHA
EATFLLRLGS TLADLGRIDE AVAACGESAA LAIGDRHLEL AALANLGYCL MAAGRLAEAE
ERIRETVEIA REVGDARSRA SGLNNLANVL LARGEPELAL GHAVEALGLF SGDSPTKAHT
ATLHTVGAVL QELGRPEEAL ESYRAGLALA EAIGDRYQEA LCHRAIGDVL ERLGMAEQAV
PHWSEALRRY RDLRLTEGEE LSGKVDGPGG A
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