| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6219 |
|---|
| Symbol | |
|---|
| ID | 8330430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7290014 |
|---|
| End bp | 7291804 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644946651 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003103870 |
|---|
| Protein GI | 256380210 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCAGG AAGCGGCGGA CCTGGTTCTG ACCGACACCC AGAACTGGGC GTCCAGGTCG
CACCGGGAGC TTTACGACTC GGTCCACACG AACAACGACC CCGGCCAGAC CGGTGAGATC
GGTTCGGAGT GGGGCCACTT CGGCACCGAG CTGACCGAGG CCGCCCGAGT GATCAACGAG
CGGGTCTCGG CCAGCGAGAG CGGCTGGACC GGCGACTCGG CCGACGGCGC GCGCGCCGCG
ATCCGGCTGC TGTCGAACTG GGTGACCGAG ACCGCGGAGA CCGCCGTCAC GGTGGGCACC
AGGGTCCAGG AGCAGGCCCA GATCATGCAG AACGCCCGGA CGAACATCCC CGAGCCGGTG
GAGTTCAACT GGGACCAGGC CACCAACACG CTCAGCTCGG GCGGCCTGAC CTGGCTCGCC
TCGTCCTCGG TGGACGTGCA GGCGGCCAAC GAGCACGCGC GGCTCCAGCA CGAGCACGCC
GTGAACGTGA TGACGTCGAT GGAGAACGAC TCCCGCAACG TCGACCAGAA CACCCCCAAG
TTCAGCCCGC CGTTCAACCC GACCACCGGC GCCTACGAGG AGCCCCAGGT CGCGACCATC
CGCACGGTGG ACGCGCCCGG CCTCGGCGAC GCCTCGGGCG CGCTGACCGC CGCCGGCGTC
ACCAACGCGG GCGGCCAGGT CTCCGGCTAC GGCGGCCCGG CGGGCGCGGG CGGCGCGGGT
GGCGGCGGCG CGGTGTCCAC CGAGGGCTAC AAGCCGGTCG GCGGCAGCGG GTACGAGGGT
CCCGGCGGCG CGACCACCTC GGGCAGCAGC ACCGGTTACG CGCCCGCCGC AGCCGGCTAC
AGCGGCCCGT CGGGCGGCGG CGGCACGACC AACCAGAGCT ACGCGTCGCC GACCCCGGCC
GCCGCGTCCG CTCCCACGTA CACGCCCCCG GCGAACTCGG GCTACACCCC GCCCGCGTCC
TCCCCGTCGC CCTCGTACGG CGGCTACACG CCGACCCCGC AGGGCGGCTA CACCCCGCCG
CAGTCGACGT ACACGCCCCC GGCGACGACG AACACCTCGG GGACGACGTA CTCGCCGCCG
AAGACGACGA ACCCCGGTTA CACGAACCCG ACGAACAACC CCGGCTACAC GCCGCCGAAC
TACCAGACCG GCACCGGCGG CAACACCGGC GGGTACACCC CGACCAACCC CGGTTACACG
AACCCGACCA ACAACCCCGG CTACACCCCG CCGCGCCCCA ACACGGGCGT CGGCACGGGC
ACCGGGTACG TCCCGCAGGG CGGGGCCAAC ACCAACCCGC GCTACACGCC GAACTTCGGC
GGCGCGGGTG GTGCGGGCGG CGCCGGTGGC GGCTTCGGCG GTGCCGGTGG CGCCGGCGGC
GGCGCGGGTG GCGCGGGCGG TGCGGCTGCT GGTCGCTTCG CCGGTGGCGC GGGCGGCTTC
GGCGGCGCGG GCGGTGGCTT CGGCGGCGCC GGTGGTGGCG CGGGCGGCGG CATGGGCGCG
GCGGGCAGCC AGATGGGCGC GGGCGGCTCG TCGGCGGCCT TCGCGGGCGG TCGCGGTGGC
GCTCCCGGCG TGGGCTTCGG CCCCGGCGCC GCGGGTGGCG CCGGTGGCGG CGGCACGCCG
ATGGGCGGCG CCCCGATGGG CGGCGCGGGC GCGGGCGGCC AGGGCGCGGA GGACAAGGAG
CGCCGTTCCG CCGCGTACAT CCGCGGTGAG GACATCTTCG AGGTGCCGGG CGAGAACCTG
CCGCCGTCGG TGATCGGCGG GGTCAAGCCC AAGAAGGGCG GCCAGTCGTG A
|
|---|
| Protein sequence | MEQEAADLVL TDTQNWASRS HRELYDSVHT NNDPGQTGEI GSEWGHFGTE LTEAARVINE
RVSASESGWT GDSADGARAA IRLLSNWVTE TAETAVTVGT RVQEQAQIMQ NARTNIPEPV
EFNWDQATNT LSSGGLTWLA SSSVDVQAAN EHARLQHEHA VNVMTSMEND SRNVDQNTPK
FSPPFNPTTG AYEEPQVATI RTVDAPGLGD ASGALTAAGV TNAGGQVSGY GGPAGAGGAG
GGGAVSTEGY KPVGGSGYEG PGGATTSGSS TGYAPAAAGY SGPSGGGGTT NQSYASPTPA
AASAPTYTPP ANSGYTPPAS SPSPSYGGYT PTPQGGYTPP QSTYTPPATT NTSGTTYSPP
KTTNPGYTNP TNNPGYTPPN YQTGTGGNTG GYTPTNPGYT NPTNNPGYTP PRPNTGVGTG
TGYVPQGGAN TNPRYTPNFG GAGGAGGAGG GFGGAGGAGG GAGGAGGAAA GRFAGGAGGF
GGAGGGFGGA GGGAGGGMGA AGSQMGAGGS SAAFAGGRGG APGVGFGPGA AGGAGGGGTP
MGGAPMGGAG AGGQGAEDKE RRSAAYIRGE DIFEVPGENL PPSVIGGVKP KKGGQS
|
|---|
| |