Gene Amir_6108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6108 
Symbol 
ID8330318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7167060 
End bp7167590 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content76% 
IMG OID644946541 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003103761 
Protein GI256380101 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.410828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC ACCCGGCGCG CTACCCGGAC CAGGTGCTGA CCGAGCGCCT GCTGCTGCGC 
AGGACCACCG ACGCCGACCT GCCCGCGGTG ACCGAGGTCC TGGGCGACCC GGCGGCGCAC 
GTCCACAACC CGGCGCGCCC GAGGACGCCG CGGGAGGTGG CCGAGCTGCT GGCGAGCTGG 
CGCGAGCACT GGCGCGCCGA CGGCATCGGC TACTGGGCGG TGCTCTCGCG GGAGAGCGGG 
GAGCTGCTCG GCGTGGGCGG CCTGCGCGTG CACGTCGTGG GCGGCGAGCG GGTGCTGAAC 
CTGTCGTACA GCTTCCGCAC GCGGCACTGG GGCCGGGGCT ACGCCACCGA GATGGCGCGC 
GCGTCCCTGG AGCGGGCGGC GGTCAGCCAC CCGGACCTGC CGCCGGTGGT CGTCACCGCC 
CCGGAGAACA CCCCGGCCCA GCGCGTGGCC GAGAAGCTGG GCCTGGCGCA CGCCGGTGAC 
GTGGAGCAGG ACCCGGAGGA GGGCGAGCTG CGCGTCTACC GCAGGCCGTG A
 
Protein sequence
MTDHPARYPD QVLTERLLLR RTTDADLPAV TEVLGDPAAH VHNPARPRTP REVAELLASW 
REHWRADGIG YWAVLSRESG ELLGVGGLRV HVVGGERVLN LSYSFRTRHW GRGYATEMAR 
ASLERAAVSH PDLPPVVVTA PENTPAQRVA EKLGLAHAGD VEQDPEEGEL RVYRRP