Gene Amir_6046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6046 
Symbol 
ID8330256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7097495 
End bp7098670 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content76% 
IMG OID644946479 
Productaminotransferase class V 
Protein accessionYP_003103699 
Protein GI256380039 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTACT TCGACCACGC CGCCACGACA CCCGTCCTCC CCGAGGCGAT CGCGGCGCTG 
ACCGAGGCGT TGTCCCGCAC GGGCAACGCC TCGTCGCTGC ACACCTCGGG GCGCAGGGCG
CGCAGGCTGG TCGAGGAGGC GCGCGAGGAC ATCGCCGACG CGCTCGGCGC GAAGCCGTCC
GAGGTGCTGT TCACCGCCGG TGGCACGGAG AGCGACAACC TGGCCGTCAA GGGCGCCTAC
TGGGCGCGGC GGCGCGAGGG CCGCAACCGG GTCGTGGCCG GGGCCGTGGA GCACCACGCG
GTGCTGGACG CGGTCGACTG GCTGGCCGAG CACGAGGGCG CCGAGGTCAC CCTGGTCGAG
CCCGACGCGG CCGGGCGGAT CACGCCCGAC GCGCTGCGGG CGGTGCTGGG CGAGGACGTC
GCGCTGGTCA CCACGATGTG GGCGAACAAC GAGGTCGGCA CGGTCAACCC GGTCGCCGAG
CTGTCCGCCG CCGCCGCCGG GTTCGGGGTT CCGCTGCACA CCGACGCCGT GCAGGCGGTC
GGCGCGGTAC CGGTCTCGTT CGCGGACAGC GGCGCGGGGG CGCTCACGGT CAGCGGGCAC
AAGATCGGCG CCCCGTACGG GATCGGCGCG CTGCTGCTCG GGAGGCAGGT CGGCGTCACC
CCGCTGCTGC ACGGCGGCGG GCAGGAGCGG GACGTGCGGT CCGGGACGCT GGACGTGCCC
GCGATCGCGG CGTTCGCGGT GGCGGTGCGG CACGCGGTGG AGCGGCGGGA GGCGTCGGCG
GCGAGGCTGC GGGCGCTGCG GGACCAGCTG GTCGGCGCGG TGCGCGCGGT GGTGCCGGAC
GTGGTCGTCA ACGGCGACCC CGAGGACGGG CTTCCGGGGC ACGCGCACCT GACGTTCCCC
GGCTGCGAGG GCGACAGCCT GCTGATGCTG CTGGACGCCA AGGGCGTGGA GTGCTCGACC
GGCTCGGCCT GCACGGCCGG GGTCGCCCAG CCCAGCCACG TGCTGCTGGC CATGGGCGTC
GACCCGGTGC TGGCGCGCGG GTCGCTGCGG TTCACGCTCG GCTGGACGTC GACCGAGGCC
GAGGTGCGCG AGCTGGCGGG CGTCATCGGA CCGGTCGTGG AGCGGGCCCG CTCGGCGGGC
ATCGCGGGGA TGCGCAGGCA CAAGGCGGAG GTGTGA
 
Protein sequence
MAYFDHAATT PVLPEAIAAL TEALSRTGNA SSLHTSGRRA RRLVEEARED IADALGAKPS 
EVLFTAGGTE SDNLAVKGAY WARRREGRNR VVAGAVEHHA VLDAVDWLAE HEGAEVTLVE
PDAAGRITPD ALRAVLGEDV ALVTTMWANN EVGTVNPVAE LSAAAAGFGV PLHTDAVQAV
GAVPVSFADS GAGALTVSGH KIGAPYGIGA LLLGRQVGVT PLLHGGGQER DVRSGTLDVP
AIAAFAVAVR HAVERREASA ARLRALRDQL VGAVRAVVPD VVVNGDPEDG LPGHAHLTFP
GCEGDSLLML LDAKGVECST GSACTAGVAQ PSHVLLAMGV DPVLARGSLR FTLGWTSTEA
EVRELAGVIG PVVERARSAG IAGMRRHKAE V