| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6038 |
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| Symbol | |
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| ID | 8330248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7089303 |
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| End bp | 7091753 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644946471 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_003103691 |
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| Protein GI | 256380031 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCAGCG ACGACCACTC CTCCCCCGAC CCCGCCGCGG ACCGGGGCGA CGACCTCGCC
ACCACCCCCG GCGCGCCCGC GGCCGACGCG CCCGAGGGCG TGCGCGCCCA GGGCCTGGAG
GACGTGCCCG CCGACGCCCG CGACCGGCAC CGCGCGCTCG CCGAGGAGGT GCGCGGCCAC
CAGTTCCGCT ACTACGTGCT CGACGCGCCC ACGATCTCCG ACGGCGAGTT CGACGCCCTG
CTGCGCGAGC TCCAGTCCCT GGAGGACGCC CACCCCGGCC TGGCCACCCC GGACTCGCCC
ACCCAGCAGG TCGGCGGCAC GTTCTCCACC GAGTTCACCG CCGTCGACCA CCTGGAGCGG
ATGCTCAGCC TGGACAACGC GTTCGACGAG GACGGGCTGC GGGCGTGGTT CGAGCGGGTC
GGCAAGGAGG TCGGCGACGC GGCGCGGTAC CTGTGCGAGC TCAAGGTCGA CGGGCTCGCC
ATCAACCTGC GGTACGAGCG CGGCAGGCTC GTCCGGGCCC TGACCAGGGG CGACGGCCGC
ACCGGTGAGG ACGTGACGCT CAACCTGCGC ACCCTGCGCG ACGTCCCCGA GGTGCTCACC
GGGACCGACG AGTGGCCGGT CCCCGAGCTG GTCGAGGTGC GCGGCGAGGT GTACTTCGCC
GTCGAGGACT TCCTGGAGCT GAACGCGAAG CTGGTGGAGG CGGGCCTGCC GCCGTTCGCG
AACCCGCGCA ACACCGCCGC GGGCTCGCTG CGGCAGAAGG ACCCGAAGGT CACCGCGTCC
CGCAGGCTGC GCATGGTGTG CCACGGCATC GGCAAGCGCG CCGGGTTCGA GCTGGAGCGC
CAGTCCGACG CGTACGCGGC GCTGCGCGCC TGGGGGCTGC CCACGTCCGA GCACACCGCC
GTCGTGGCGA CGTTCGACGA GGTGTGGGCG CGCGTCGCGC ACTGGGGCGA GCACCGGCAC
GACGCCGCGC ACGAGATCGA CGGGCTCGTG GTGAAGGTGG ACGAGGTCCC GCTGCAGCGC
AGGCTCGGCA GCACCTCGCG CGCGCCCCGC TGGGCCATCG CGTTCAAGTA CCCGCCGGAG
GAGGCCACCA CGACGCTGCT CGACATCGGC GTCCAGGTCG GCCGCACCGG GCGGGTCACC
CCGTTCGCGA TCATGGAACC GGTGAAGGTC GCGGGCTCCA CGGTGGCCCG CGCGACGCTG
CACAACGCGT CCGAGGTCAA GCGCAAGGGC GTGCTCATCG GCGACCGGAT CGTCATCCGC
AAGGCGGGCG ACGTGATCCC CGAGGTGCTC GGCCCGGTCG TGGACGTGCG CCCGGCGGAC
GCCAGGGAGT TCGTGATGCC CGCGTCCTGC CCGGAGTGCG GGCACGCGCT GCGCCCCATG
AAGGAGGGGG ACGTGGACAT CCGCTGCCCC AACGCCGAGG GGTGCCCCGC GCAGCTGCGG
GAGCGGTTGG CCTACCTGGC CTCGCGGTCC GCGCTGGACG TCGAGGTGCT CGGGTACGAG
GGCGCGGCGG CGCTGGCGTC GTCCGAGGTG TACGGGAACG AGGCGGACCT GTTCGACCTC
ACCGCCGAGG ACCTGCTGCG CGTGGACCTG TTCCGCAACC AGGACGGCGC GCTGGTGACG
AACGGCGCGA AGCTGCTGGA GAACCTGGAG GCCGCCAAGT CGCAGCCGCT GTGGCGGGTC
TTGGTGGCCC TGTCGATTCG CCACGTGGGG CCGACGGCGG CGCGCGCGCT GGCGGTGGAG
TTCGGCGGCG TGCAGGCCAT CCTGGACGCC GAGGAGGCCG ACCTGGCGGC GGCGGGCGGG
GTCGGGCCGA CGATCGCGGC GGCGGTGCGG GAGTGGGCGC TGACCCCGTG GCGGCAGGAG
GTCGTGCGCC GCTGGGCCGC GGCGGGGGTG CGCATGGTGG ACGAGCGCGA CACCACGATC
CGGCGCGACC TGGAGGGGTT GTCGATCGTG GTCACCGGGA CGCTGGCGGA CTTCTCCCGC
GACGAGGCCA AGGACTCGAT CCTGGTGCGG GGCGGCAAGG CGGTCGGGTC GGTGTCGAAG
AAGACGGCGT TCGTGATCGT GGGGGACAAC CCCGGCAGCA AGGCGGACAA GGCCGCGCAG
CTGAAGGTGC CGGTGCTGGA CGAGGCCGGG TTCCGGGTGC TGCTGGAGCG GGGGCCGGAG
GCCGCCGCGG CGGTCGCGGT GGTCGCGGTG GTCGCGGTGG CGGGGAGTTC GGAGGACGGG
GCTGGAGCGG GGGCCGGGGC AGGCTCGGGT GACGGGGCTG GTTCGAGTGA CGGGACTGGT
TCCGGGGCCG GGGCCGGCTC GGGCGAGGCG ATCGGCGGGG ATGCGGGGGA GAGCGCTTCC
ACGGGCGGCG GGGTGAGCGG GGAGAGCGCT CCCACGGCTG GTGGCGCGGG CGCGGAGAGC
GTTCCCACGA GCGGCGCGGT CGAGCCGGGG GAGGGGCCTG CGGCGGGGTG A
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| Protein sequence | MTSDDHSSPD PAADRGDDLA TTPGAPAADA PEGVRAQGLE DVPADARDRH RALAEEVRGH
QFRYYVLDAP TISDGEFDAL LRELQSLEDA HPGLATPDSP TQQVGGTFST EFTAVDHLER
MLSLDNAFDE DGLRAWFERV GKEVGDAARY LCELKVDGLA INLRYERGRL VRALTRGDGR
TGEDVTLNLR TLRDVPEVLT GTDEWPVPEL VEVRGEVYFA VEDFLELNAK LVEAGLPPFA
NPRNTAAGSL RQKDPKVTAS RRLRMVCHGI GKRAGFELER QSDAYAALRA WGLPTSEHTA
VVATFDEVWA RVAHWGEHRH DAAHEIDGLV VKVDEVPLQR RLGSTSRAPR WAIAFKYPPE
EATTTLLDIG VQVGRTGRVT PFAIMEPVKV AGSTVARATL HNASEVKRKG VLIGDRIVIR
KAGDVIPEVL GPVVDVRPAD AREFVMPASC PECGHALRPM KEGDVDIRCP NAEGCPAQLR
ERLAYLASRS ALDVEVLGYE GAAALASSEV YGNEADLFDL TAEDLLRVDL FRNQDGALVT
NGAKLLENLE AAKSQPLWRV LVALSIRHVG PTAARALAVE FGGVQAILDA EEADLAAAGG
VGPTIAAAVR EWALTPWRQE VVRRWAAAGV RMVDERDTTI RRDLEGLSIV VTGTLADFSR
DEAKDSILVR GGKAVGSVSK KTAFVIVGDN PGSKADKAAQ LKVPVLDEAG FRVLLERGPE
AAAAVAVVAV VAVAGSSEDG AGAGAGAGSG DGAGSSDGTG SGAGAGSGEA IGGDAGESAS
TGGGVSGESA PTAGGAGAES VPTSGAVEPG EGPAAG
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