Gene Amir_6037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6037 
Symbol 
ID8330247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7088486 
End bp7088974 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content74% 
IMG OID644946470 
Productzinc finger SWIM domain protein 
Protein accessionYP_003103690 
Protein GI256380030 
COG category[S] Function unknown 
COG ID[COG4715] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACGC TCACCCCTGC CCTGTTGCGG CACCGCGCGG GCCACAAGTC CTACTGGCGC 
GGACTGGCCT ACCGGGACGC CGTGGTCTCC GTGGTGCACC ACCCCAGGCA CGTGACCGGG 
GTGGTGCGCG GCAGCTCTGA GTACTCGATC ACGCTGGCCT GGGACGCCGA GGGGAACCTG 
CGGGGGACCT GCGCCTGCCC GTACGGGGAG CAGGGGTTCT TCTGCAAGCA CTGCGTCGCC 
GTGGGCCTGG TGCTGCTCGA CCGGGGCGAG ACCGTGCCCG CGCCGGACGC CGAGGACGAC 
GAGCTCCGCA CCGCGCTCAC CCGCCTGCCG CGCGCGGCGC TCGTGGAGCA CCTCTACGAG 
CAGGCCACGC GCGACACCGC GCTCCGCGAG CGGATCCTGG CCGAGGCCGA GGAGGCGACG 
CGCGCGACGG GAATCCCCAA CCAGCCCAAC GGCGCCGTCC AGGGCAAGGT CATCCCGTAC 
CGCCGCTGA
 
Protein sequence
MATLTPALLR HRAGHKSYWR GLAYRDAVVS VVHHPRHVTG VVRGSSEYSI TLAWDAEGNL 
RGTCACPYGE QGFFCKHCVA VGLVLLDRGE TVPAPDAEDD ELRTALTRLP RAALVEHLYE 
QATRDTALRE RILAEAEEAT RATGIPNQPN GAVQGKVIPY RR