| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6005 |
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| Symbol | |
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| ID | 8330212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7049381 |
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| End bp | 7049983 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644946435 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_003103658 |
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| Protein GI | 256379998 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0588518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGCGT TCAGCACGCA CACCGGCGTC GGGGTCCCGC TGCGCCGGTC CAACGTGGAC
ACCGACCAGA TCATCCCGGC GGTCTACCTG AAGCGGGTCA CCCGCTCGGG CTTCGAGGAC
GGGCTGTTCG CCGCGTGGCG CGGCGACGAG CAGTTCGTGC TCAACCAGGA GCCGTTCCGC
GCGGGCAGCG TCCTGGTCGC CGGACCGGAC TTCGGCACCG GCTCCTCCCG CGAGCACGCG
GTGTGGGCGC TCATGGACTA CGGCTTCCGG GTGGTGGTCT CGTCCCGCTT CGCCGACATC
TTCCGGGGGA ACTCGGGCAA GCAGGGCCTC GTCGCGGCGC AGTGCGAGCA GTCCGATGTC
GAGCAGCTGT GGAAGATCCT GGAGAACGAG CCGGGCGCCT CGGTCACCGT GGACCTGGCG
CAGAAGACGG TGTCGGCGAA GGACTTCACG GCCCGCTTCG ACATCGACGA CTACACCCGC
TGGCGGTTGC TGGAGGGATT GGACGACATC GCGTTGACGC TGCGGCACTC CGACTCGATC
GCGGAGTTCG AGTCCACCCG AGCCGCTTGG CTGCCGGACA CCGAGGTGCG GCCCGCGAGC
TAG
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| Protein sequence | MEAFSTHTGV GVPLRRSNVD TDQIIPAVYL KRVTRSGFED GLFAAWRGDE QFVLNQEPFR
AGSVLVAGPD FGTGSSREHA VWALMDYGFR VVVSSRFADI FRGNSGKQGL VAAQCEQSDV
EQLWKILENE PGASVTVDLA QKTVSAKDFT ARFDIDDYTR WRLLEGLDDI ALTLRHSDSI
AEFESTRAAW LPDTEVRPAS
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