Gene Amir_5990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5990 
Symbol 
ID8330197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7034433 
End bp7035080 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content74% 
IMG OID644946420 
Producthypothetical protein 
Protein accessionYP_003103643 
Protein GI256379983 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGG AAACCACTCC CCGCAGCACC ATCAAGCGGG GCGCGAAGCG GTCCGTGCCC 
GAGCGGGACG CGTTGCACGC CGTGCTGGAC GCGGGACTGG TCTGCCACCT CGCCGTCGTG 
GTGGACGGCG CCCCGCTCGT GCTCCCCACC GGCTACGGCC GCGACGGCGA CACCCTGTAC 
CTGCACGGCT CCACCGGGGC CCGCTCGCTG CGCGAGGCGG CCGAGGGGGT GCCGGTGTGC 
GTGGCGGTGA CGCTCCTGGA CGGCGTCGTC TACTCGCGCT CGGCGTTCGA CTTCTCGATG 
AACTACCGCA GCGCGGTCGT CCACGGCACG GCGGTGCAGG TGGACGACCC GGAGCGCAAG 
CTGCACGGGC TGCGCGTGCT GACCGAGCAC CTGGCCCCCG GCTCGTGGGA CGTGGTGCGC 
GAGCCCAACC GCAAGGAGCT GTCGGCGACG CGGGTGCTCG CGGTCGACCT GGCGGAGGCG 
TCGGTGAAGA TCCGCACCGG CCCGCCGGGG GACGAGCCGG AGGACGTCGA GGCGGGCCTG 
GTGTGGGCGG GCGTGCTGCC GCTGACGACG TCCTGGGGCG AGCCGGAGCC GTGCCCGCAG 
CTGCCCGAGG GGTTCGAGGT GCCCGAGCAC GTGGCCAAGC GCGCCTGA
 
Protein sequence
MTLETTPRST IKRGAKRSVP ERDALHAVLD AGLVCHLAVV VDGAPLVLPT GYGRDGDTLY 
LHGSTGARSL REAAEGVPVC VAVTLLDGVV YSRSAFDFSM NYRSAVVHGT AVQVDDPERK 
LHGLRVLTEH LAPGSWDVVR EPNRKELSAT RVLAVDLAEA SVKIRTGPPG DEPEDVEAGL 
VWAGVLPLTT SWGEPEPCPQ LPEGFEVPEH VAKRA