| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5954 |
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| Symbol | |
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| ID | 8330161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7002161 |
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| End bp | 7002649 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644946385 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003103608 |
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| Protein GI | 256379948 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.609078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACCGCG GGGAAGATGT CGTCAGGCAG CTCTACGGCC GCTGGCGCGG CCCGCTGCGC
GGCTACGTCC TGCGCCTGGT CGGGGGGGAC CACCGGTACG CCGAGGACGT CGTCCAGGAG
ACCCTGCGCA GGGCGCGGGG CAGCGCGGAC GTCCGCACCC CCGAGGAGGC CGGGCCGTGG
CTGTACGCGG TGGCCCGCGC GCTGGTGGCG TCCGGGTTCC GGTGCGCGGG GGGTGAGCGG
CCCGAGGAGC CGCCGTCCGA GGTCGACGCC GTCGACCACG CGCTCCAGGG CTGGCAGGTC
GCCGAGGCGC TGCGCGGGCT GAGCCGCGAC CACCGCGACG CCGTCGTCGA GCTGCACTAC
CGCAGGCGCA CCGTCGCCGA GGCCGCCGCC GCGCTCGGCA TCCCGCAGGG CGCGGTCAAG
TCCCGCTGCT TCTACGGGCT GCGGGCGCTG CGCGACGCGC TGGCCGAGCG CGGGGTGACC
GAGCCGTGA
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| Protein sequence | MDRGEDVVRQ LYGRWRGPLR GYVLRLVGGD HRYAEDVVQE TLRRARGSAD VRTPEEAGPW
LYAVARALVA SGFRCAGGER PEEPPSEVDA VDHALQGWQV AEALRGLSRD HRDAVVELHY
RRRTVAEAAA ALGIPQGAVK SRCFYGLRAL RDALAERGVT EP
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