Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5943 |
Symbol | |
ID | 8330150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6988978 |
End bp | 6989751 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644946374 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003103597 |
Protein GI | 256379937 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGGAG CGTGTCCGAA GGTGTCGCGC GAGAGCGGTG GCGTGCAGTC CCTCCAGCGA GCCTTCGACC TGCTGGAGCG GCTCGCCGAC GCGGGCGGTG AGGCGAGCCT GTCGGAGCTG GCGGCCGTCT CCGGGCTGCC GCTGCCGACC ATCCACCGGC TCATCCGCAC CCTGGTCGAC CTGGGCTACG TGCGCCAGCA CGACAACCGC CGGTACGCGC TCGGCCCGAG GCTGATCCGG CTCGGCGAGG GCGCGGGCAG GCAGTTCGGC ACGTGGGCGC GCCCGCTGCT GGCCGAGCTG GTGGACGAGA CCGGCGAGAC GGCGAACCTG GCGGTGCTCG ACGGCGACGA GATCGTGTAC GTGGCGCAGG CCCCGTCGCG GCACTCGATG CGGATGTTCA CCGAGGTCGG CAGGCGGGTG CTGCCGCACG CGACCGGCGT CGGCAAGGCG GTGCTGGCCG CGCTGCCCCG CGACCGGGCG CGGGAGCTGC TGGAGCGCAC CGGGCTGCCC GCGCGCACCC CGAACACGAT CACCGACCTG GGCGCGATGC TGGCCGAGCT GGACCTGGTC GCCGCGCGCG GGCACGCGCT GGACGAGGGC GAGCAGGAGC TGGGCGTGCG GTGCGTGGCG GTGGCCGTGC CGGGCGGTCC GACGCCCGCG GCGGTGTCGG TGTCCGGTCC GGAGGGACGG CTGACGCGGG AGGCGGCGGA GGGGATCACC GGGCTGCTGC ACGGGATCGC CGACCGGCTG GCCTCGCGTC CCACGATGGG CTGA
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Protein sequence | MEGACPKVSR ESGGVQSLQR AFDLLERLAD AGGEASLSEL AAVSGLPLPT IHRLIRTLVD LGYVRQHDNR RYALGPRLIR LGEGAGRQFG TWARPLLAEL VDETGETANL AVLDGDEIVY VAQAPSRHSM RMFTEVGRRV LPHATGVGKA VLAALPRDRA RELLERTGLP ARTPNTITDL GAMLAELDLV AARGHALDEG EQELGVRCVA VAVPGGPTPA AVSVSGPEGR LTREAAEGIT GLLHGIADRL ASRPTMG
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