Gene Amir_5943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5943 
Symbol 
ID8330150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6988978 
End bp6989751 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content76% 
IMG OID644946374 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003103597 
Protein GI256379937 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGGAG CGTGTCCGAA GGTGTCGCGC GAGAGCGGTG GCGTGCAGTC CCTCCAGCGA 
GCCTTCGACC TGCTGGAGCG GCTCGCCGAC GCGGGCGGTG AGGCGAGCCT GTCGGAGCTG
GCGGCCGTCT CCGGGCTGCC GCTGCCGACC ATCCACCGGC TCATCCGCAC CCTGGTCGAC
CTGGGCTACG TGCGCCAGCA CGACAACCGC CGGTACGCGC TCGGCCCGAG GCTGATCCGG
CTCGGCGAGG GCGCGGGCAG GCAGTTCGGC ACGTGGGCGC GCCCGCTGCT GGCCGAGCTG
GTGGACGAGA CCGGCGAGAC GGCGAACCTG GCGGTGCTCG ACGGCGACGA GATCGTGTAC
GTGGCGCAGG CCCCGTCGCG GCACTCGATG CGGATGTTCA CCGAGGTCGG CAGGCGGGTG
CTGCCGCACG CGACCGGCGT CGGCAAGGCG GTGCTGGCCG CGCTGCCCCG CGACCGGGCG
CGGGAGCTGC TGGAGCGCAC CGGGCTGCCC GCGCGCACCC CGAACACGAT CACCGACCTG
GGCGCGATGC TGGCCGAGCT GGACCTGGTC GCCGCGCGCG GGCACGCGCT GGACGAGGGC
GAGCAGGAGC TGGGCGTGCG GTGCGTGGCG GTGGCCGTGC CGGGCGGTCC GACGCCCGCG
GCGGTGTCGG TGTCCGGTCC GGAGGGACGG CTGACGCGGG AGGCGGCGGA GGGGATCACC
GGGCTGCTGC ACGGGATCGC CGACCGGCTG GCCTCGCGTC CCACGATGGG CTGA
 
Protein sequence
MEGACPKVSR ESGGVQSLQR AFDLLERLAD AGGEASLSEL AAVSGLPLPT IHRLIRTLVD 
LGYVRQHDNR RYALGPRLIR LGEGAGRQFG TWARPLLAEL VDETGETANL AVLDGDEIVY
VAQAPSRHSM RMFTEVGRRV LPHATGVGKA VLAALPRDRA RELLERTGLP ARTPNTITDL
GAMLAELDLV AARGHALDEG EQELGVRCVA VAVPGGPTPA AVSVSGPEGR LTREAAEGIT
GLLHGIADRL ASRPTMG