Gene Amir_5928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5928 
Symbol 
ID8330135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6969439 
End bp6970155 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID644946359 
ProductAbortive infection protein 
Protein accessionYP_003103582 
Protein GI256379922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.615646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGTTCG CCCCGGAACC CGCGCCGACC GGACAGCGCT GGGGCTTCGG CGCGTTCCTC 
GTCGTGCAAG CGGTCTTCGT GCTCAGCGCG GTGTTCATCA CCGCGGCGGG CCGCGAGTTC 
GGGGTGGACC CCGTCACCTT CGTCCTCGTC GGGGCGATGA CGCCGACCCT GCTCGCCGCC 
GCCACCGCCG TCCTGATCAC CAAGCTGCGC GGCAACGGCC CGTTCGTCGA CCTGAGGCTG 
GAGTGGAACT GGGCGGACGT GAAGGTCGGC TTCAAGCTCG GCCTGCTCGG CCTGGTGCTG 
ACCTACGTGG CCGCGCTCAC CTGGTCCCGC CTGGTCGGCG ACCAGAACGC CACCTCGGCC 
ATCGGCGAGC TGGTCGACGG CGCGGCGCTG CCGCTGTCCG CCGCCATCGC CATGTTCTGC 
TACGTGTGCT TCATCGGCCC GGTCTGCGAG GAGCTGATCT ACCGGGGCCT GCTGTGGGGC 
GCGATCGAGC GGCAGGGCTG GAGCCGCTGG GCGGCGTTCA CGCTCAGCAC CGCGATCTTC 
GCCGCCAGCC ACCTGGAACC GATCCGCACC GTGCTGCTGA TCGTCATCTC GCTGCCCATC 
GGCATCGCGC GGCTGATCAC CCGCAGGCTC ACCGCCAGCG TGGTGGCCCA CGTGGTCAAC 
AACTTCCTGC CCGGACTGAC CATGCTGCTG ATCGCACTGG GGGTGATGCC CGCGTGA
 
Protein sequence
MGFAPEPAPT GQRWGFGAFL VVQAVFVLSA VFITAAGREF GVDPVTFVLV GAMTPTLLAA 
ATAVLITKLR GNGPFVDLRL EWNWADVKVG FKLGLLGLVL TYVAALTWSR LVGDQNATSA 
IGELVDGAAL PLSAAIAMFC YVCFIGPVCE ELIYRGLLWG AIERQGWSRW AAFTLSTAIF 
AASHLEPIRT VLLIVISLPI GIARLITRRL TASVVAHVVN NFLPGLTMLL IALGVMPA