Gene Amir_5917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5917 
Symbol 
ID8330124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6962416 
End bp6962769 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content75% 
IMG OID644946348 
Productprotein of unknown function UPF0102 
Protein accessionYP_003103571 
Protein GI256379911 
COG category[L] Replication, recombination and repair 
COG ID[COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00245822 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGT CCCACGTGCT CGGCAGGCTC GGCGAGAGCG TCGCGTGCCG CTACCTGGAG 
CGCCAGGGCC TGGTGGTGCT GGCCCGGAAC TGGCGCTGCG CCTCGGGTGA GTTGGACGTG
GTCGCCACGG ACGGCGTGCG GCTCGTGGTG TGCGAGGTGA AGTGCCGCTC GGGTTCCGGC
CGGGGCGATC CCCTGGAGGC GGCGACGCCC GAGCAGCTCG ACCGGGTGCG CAGGACCGCG
TACCGGTGGC GTCGCGAGCA CCGGCTGTCC GGGGTGGGGG TGCGCGTCGA CCTGGTGGGC
CTGGAGTGGC CCCCAGGAGG CCCGGTGCGG CTGCGGCACG TCAGGGGCGT GTGA
 
Protein sequence
MTASHVLGRL GESVACRYLE RQGLVVLARN WRCASGELDV VATDGVRLVV CEVKCRSGSG 
RGDPLEAATP EQLDRVRRTA YRWRREHRLS GVGVRVDLVG LEWPPGGPVR LRHVRGV