Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5917 |
Symbol | |
ID | 8330124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6962416 |
End bp | 6962769 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644946348 |
Product | protein of unknown function UPF0102 |
Protein accession | YP_003103571 |
Protein GI | 256379911 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00245822 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCGT CCCACGTGCT CGGCAGGCTC GGCGAGAGCG TCGCGTGCCG CTACCTGGAG CGCCAGGGCC TGGTGGTGCT GGCCCGGAAC TGGCGCTGCG CCTCGGGTGA GTTGGACGTG GTCGCCACGG ACGGCGTGCG GCTCGTGGTG TGCGAGGTGA AGTGCCGCTC GGGTTCCGGC CGGGGCGATC CCCTGGAGGC GGCGACGCCC GAGCAGCTCG ACCGGGTGCG CAGGACCGCG TACCGGTGGC GTCGCGAGCA CCGGCTGTCC GGGGTGGGGG TGCGCGTCGA CCTGGTGGGC CTGGAGTGGC CCCCAGGAGG CCCGGTGCGG CTGCGGCACG TCAGGGGCGT GTGA
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Protein sequence | MTASHVLGRL GESVACRYLE RQGLVVLARN WRCASGELDV VATDGVRLVV CEVKCRSGSG RGDPLEAATP EQLDRVRRTA YRWRREHRLS GVGVRVDLVG LEWPPGGPVR LRHVRGV
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