| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5913 |
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| Symbol | |
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| ID | 8330120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6956439 |
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| End bp | 6957257 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644946345 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_003103568 |
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| Protein GI | 256379908 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00269846 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGCGGC CTGCTCATGC CGCTGCCGAG TCCCGGACCG CTGATGACGT CGAAGCCGGG
ATCATCGCGC TGTGGCACAC CTACGGGCAG TCGCGCGAGC AGGGGCTGCG GGATCGGTTG
GTGCTGCACT ACGCGCCGCT GGTCAAGTAC GTCGCCGGGC GGGTCGGGAC CGGGTTGCCC
GCGCACGTCG ACGTCGCCGA CCTGATCCAG TCCGGGATCT TCGGGCTGGT CGACGCCATA
GAGAAGTTCG AGCCCGAGCG CGGCCTGAAG TTCGAGACCT ACGCCATGCA GCGCATCCGT
GGCGCGATCC TGGACGACCT CAGATCGCAG GACTGGGTTC CCCGTTCCGT TCGCAGCAGG
GCTCGGGACG TCGAGCGGGC GCTCGAGCGG CTCGGTGGGC GGTTGCAGCG GACGCCCACC
GACCGGGAGC TGGCCGCTGA GCTGAAGATC GGGCTCGGGG AGCTGCGGGA GCTGTACGCG
CAGTTCCAGC TCACCAGCGT CGTCGCGCTG GACGAGCTGA TCGCCGCAGG CCGGGCCGCC
GGGAGCGCGG GGTCCTCGCT GGCGGAGTCG TTGCCCGACG AAGGCGCCGA GGACCCGGTC
GCCTCGCTGG TCGACCAGGA CAGCCGTCGG CAGCTCGCCG ACGCCATCGC GCAGCTGGCC
GAGCGGGACC GGGTCGTGGT CACGCTGTAC TACTTCGAGA ACCTGACGCT GGCCGAGATC
GGCAAGGTCC TCGGGGTCAC CGAGTCCCGT GTCTGCCAAC TGCACACCAG AGCCGTCCTC
CGGCTCCGCA CCAAGATCAA CGAGCAGCTC GAAACCTGA
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| Protein sequence | MGRPAHAAAE SRTADDVEAG IIALWHTYGQ SREQGLRDRL VLHYAPLVKY VAGRVGTGLP
AHVDVADLIQ SGIFGLVDAI EKFEPERGLK FETYAMQRIR GAILDDLRSQ DWVPRSVRSR
ARDVERALER LGGRLQRTPT DRELAAELKI GLGELRELYA QFQLTSVVAL DELIAAGRAA
GSAGSSLAES LPDEGAEDPV ASLVDQDSRR QLADAIAQLA ERDRVVVTLY YFENLTLAEI
GKVLGVTESR VCQLHTRAVL RLRTKINEQL ET
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