| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5889 |
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| Symbol | |
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| ID | 8330096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6932550 |
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| End bp | 6933761 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644946321 |
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| Product | peptidase M50 |
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| Protein accession | YP_003103544 |
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| Protein GI | 256379884 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGTTCG TGTTGGGTGT GGTGCTGTTC GCGCTGCTCA TCGGCATTTC GATCGCGCTG
CACGAGCTGG GACACCTGGC AACGGCCAAG GCCTTCGGCA TGAAGGTGAC CCGGTACTAC
ATCGGCTTCG GCCCGCGCGT CTGGTCGATG CGCAGGGGTG AGACCGAGTA CGGCCTCAAG
GCCATCCCGG CGGGCGGCTT CTGCGAGATC GTCGGCATGA CCGCGCTCGA CGAGCTGTCG
CCCGAGGACG AGAAGCGCGC CTTCTACCGG CAGAAGACCT GGAAGCGCGT CGTCGTGCTC
TCCGCCGGGT CCATCACGCA CTTCATCGTC GGCTTCGTCG TGCTGTACGC GATGGCCGCC
ACCATCGGCC TGCCGGACAT CCGGGACGAG GCCGTGGTGT CGAAGGTCTC GCAGTGCGTG
CCCGCCACCG CCGCCGAGGC CAAGAAGGAG AACCCGACCT GCGCGCCGAC CGACCCGACG
CCCGGCGTCA GCGCGGGCGT GCAGCAGGGT GACCGGATCG TCGCGGTCGA CGGCCAGCGC
CTGCCGACCT GGACCGAGGT CCAGAAGAAG ATCCAGCAGA GCAGCGGCCC CACCGAGGTG
GTCGTCCTGC GCGGTGACGA CGAGGTCAAG CTGACCGTCG ACATCCCGCA GGTCGAGCGC
GAGCTGCGGC GCGCCGACGG CTCCACCTAC GTCGACACCG TCGGCGTCGT CGGCGTCGCC
AAGTCCCGGC TGTACGAGTA CAACGCGCTC ACCGCGGTCG GCGGCGCGAC CAAGTACACC
GGCGACATGT TCGCCAACAC CTGGCGCGGC CTGATGAAGT TCCCCGAGAA GATCCCCATG
GTCATCAAGG CCATCGGCGG CGGCGAGCGC GACCCGGAGG CCCCGGTCAG CGTGGTCGGC
GCCTCCATCC TCGGAGGCGA CGCCGTGAGC GCGGGCCTGT GGCACTTCTT CTGGCTCATG
CTGGCGGGCC TGAACTTCTT CATCGGCGTG TTCAACCTCC TGCCGCTGCT CCCGCTGGAC
GGCGGCCACA TCGCCGTCAA CCTGTACGAG CGGGTGCGCG ACTGGGTCCG CAAGCTGCGC
GGCAAGCCCG CGGGGCCCCC GGTGAACTAC CTGCGGCTGC TGCCGCTGAC CTACTTCGCC
ATCTTCGTCG GCGGCGCGAT CACGCTGCTG ACGATCACCG CGGACATCGT CAACCCCATC
CGGCTCCCCT GA
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| Protein sequence | MAFVLGVVLF ALLIGISIAL HELGHLATAK AFGMKVTRYY IGFGPRVWSM RRGETEYGLK
AIPAGGFCEI VGMTALDELS PEDEKRAFYR QKTWKRVVVL SAGSITHFIV GFVVLYAMAA
TIGLPDIRDE AVVSKVSQCV PATAAEAKKE NPTCAPTDPT PGVSAGVQQG DRIVAVDGQR
LPTWTEVQKK IQQSSGPTEV VVLRGDDEVK LTVDIPQVER ELRRADGSTY VDTVGVVGVA
KSRLYEYNAL TAVGGATKYT GDMFANTWRG LMKFPEKIPM VIKAIGGGER DPEAPVSVVG
ASILGGDAVS AGLWHFFWLM LAGLNFFIGV FNLLPLLPLD GGHIAVNLYE RVRDWVRKLR
GKPAGPPVNY LRLLPLTYFA IFVGGAITLL TITADIVNPI RLP
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