Gene Amir_5880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5880 
Symbol 
ID8330087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6922672 
End bp6923343 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content76% 
IMG OID644946312 
ProductGntR domain protein 
Protein accessionYP_003103535 
Protein GI256379875 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGTTGG CCACTACTCG ACGGGCGGGC CTCGTCGACC AGGTGATCGA CCAGATGAGG 
GGGGCGATCG CCAGCGGTGA ATGGCCGGTC GGCCGGCGCA TCCCCCCCGA GCCGGAGCTG 
GTGACGGCGC TGGGCGTGGG GCGCAACACC GTGCGCGAGG CGGTGCGGGC GCTGGCCCAC 
GCCGGCCTGC TGGAGGTCCG CCAGGGCGAC GGGACGTTCG TGCGCGCCAC GAGCGAGCTG 
TCCGGGGCGG TGCGCAGGCT GTGCGGCAGC GAGCTGCGGG ACGTGCTCCA GGTGCGGCGG 
ACGCTGGAGG TCGAGGGCGC GCGGCTGGCC GCGACCCAGC GCACCGAGGA GGAGCTGGCC 
CGGCTGGAGG TCGCGCTCGC CGAGCGGGAC TCGGCGCTGG CCGCGAAGGA CTGGGAGCGG 
CTGGTCGAGC GGGACGCGCA GTTCCACGAG CTGCTGCTCC AGTGCTCGCA CAACACCCTG 
CTGGCCGAGC TGTACCAGGG CCTGACCGAG GCGGTGCGGG CCAGCATCGA CGCGACCGTG 
CGCACCGCGC CGGACGACGA CGACCTGTCC CACGAGGGCC TGCTCCAGGC GATCCGCGAC 
GCCGACCCGG CGCGGGCGGC GCTGGAGGCG GGCGGGTTCC TGGAGGAGCT GCTGGAGCGG 
CACGGGGAGT AG
 
Protein sequence
MPLATTRRAG LVDQVIDQMR GAIASGEWPV GRRIPPEPEL VTALGVGRNT VREAVRALAH 
AGLLEVRQGD GTFVRATSEL SGAVRRLCGS ELRDVLQVRR TLEVEGARLA ATQRTEEELA 
RLEVALAERD SALAAKDWER LVERDAQFHE LLLQCSHNTL LAELYQGLTE AVRASIDATV 
RTAPDDDDLS HEGLLQAIRD ADPARAALEA GGFLEELLER HGE