| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5873 |
|---|
| Symbol | |
|---|
| ID | 8330080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6912767 |
|---|
| End bp | 6915124 |
|---|
| Gene Length | 2358 bp |
|---|
| Protein Length | 785 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644946305 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_003103528 |
|---|
| Protein GI | 256379868 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGACA CGTTGGCGCT CCCGGTCCTG CCCCTCGACG ACACCGTCGT GCTGCCGGGC
ATGGTCGTCC CGGTGCGCCT GACCGGTTCG GACGCGGGCG CCGAGGCGCG GGCCGCGGTC
GAGGCGGCCA CCTCGGCCGC CGGAGGGGTG AACGGCGCGC GGGTGCTCCT GGTTCCCCGG
CTGGACGGCC GCTACGCCAA GGTCGGCGCG CTGGCCACGG TCGAGCAGGT CGGCAGGCTC
GCGGGAGGCG AGCGCGCCGC CGTGCTGCGC GCGACCGAGC GGGTGCGCAT CGGCACCGGC
ACCACCGGGC CCGGCGCGGC GCTGTGGGTG GAGGCCACCG TCGTCGAGGA GCCGCCGCCG
GACGAGCGCG CGCGCTCCCT GGCCCGCGAC TACCGCGCGG TGGTGACCAC GATCCTCCAG
CAGCGCGGCG CCTGGCAGGT CGTGGACTCG GTCCGCCAGG TCGACGGCCC CTCCGCGCTC
GCGGACCTGG CCGGGTACGC GCCGTACCTG GAGAACGACC AGAAGGTGTG GCTGCTGGAG
ACCGGCGACG TCGGCGACCG CCTGGAGCGG CTGCTGGAGT GGGGCCGGGC GCACCTGGCC
GAGCTGGACG TCGCCGAGTC CATCGCCAAG GACGTCAAGG AGGGCGTGGA GAAGCAGCAG
CGGGAGTTCC TGCTGCGCCA GCAGCTCGCC GCCATCCGCA AGGAGCTGGC CGAGCTGGAC
GGCAAGCCCG CCACCGAGGA GCAGGACTAC CGGGCCCGCG TGGAGGCCGC CGAGCTGCCG
GAGAAGGTGC GGGAGGCGGC GCTGCGCGAG GTCGACAAGC TGGAGCGCAC CTCCGAGCAG
TCCCCCGAGG TCGGCTGGAT CCGCACCTGG CTCGACACCG TGCTCGACCT GCCGTGGGGC
GAGCGCACCG AGGACTCCTA CGACATCGCG GGCGCGCGGG CCGTGCTCGA CGCCGACCAC
GCGGGCCTGG ACGACGTGAA GGAGCGCATC ACCGAGTACC TGGCGGTGCG GCGCAGGCGC
GCGGACCGGG GCATGGGCCT GGTCGGCGGG CGCGGCGGCG GCGCGGTGCT CGCGCTCGTC
GGGCCGCCCG GCGTGGGCAA GACCTCGCTC GGCGAGTCCG TCGCCCGCGC GATGGGCCGC
AAGTTCGTCC GCGTCGCCCT CGGCGGCGTG CGCGACGAGG CGGAGATCCG GGGCCACCGG
CGCACCTACG TCGGCGCGCT GCCGGGCCGC ATCGCGCGGG CCATCTCCGA GGCGGGCTCG
ATGAACCCGG TCGTGCTGCT CGACGAGATC GACAAGGTCG GCGCCGACCA CCGGGGCGAC
CCGACCGCCG CGCTGCTGGA GGTGCTGGAC CCGGCGCAGA ACCACACGTT CCGGGACCAC
TACCTGGAGG TCGAGCTGGA CCTGTCCGAC GTGGTGTTCC TGGCCACGGC GAACGTGCTG
GAGTCCATCC CCGGCCCGCT GCTCGACCGC ATGGAGCTGG TGCGGCTCGA CGGGTACACC
GAGGACGAGA AGGTCACCAT CGCCCGCGAC CACCTGCTGC CCAGGCAGGT CGAGCGGGCC
GGGCTGGAGC CGGGCGACGT GGAGGTCACC GGGGCCGCGC TGCGCAGGCT CGCCGGGGAG
TACACCCGCG AGGCCGGGGT GCGGCAGCTG GAGCGCTCGC TCGCGCGGGT GCTGCGCAAG
GTGACCGCCG GGGTCGCGCT GGACCGGGCC GAGCTGCCCG TCACCGTGGA CGGCGGCGAC
CTGGAGGGCT ACCTGAAGTC GCCGAAGTTC ACCCCCGAGT CCGCCGAGCG CACCGCCGTT
CCGGGCGTGG CCACGGGCCT CGCGGTGACC GGTGCGGGCG GCGACGTGCT GTTCGTGGAG
GCCGCGCTCG CCGAACCCGG CACCGGGGCC GGCGGCGTGG TGCTCACCGG GCAGCTCGGC
GAGGTGATGA AGGAGTCCGC GCAGATCGCC CTGTCCTACC TGCGGGCGCA CGACGAGCGG
GCCGCGACCC TGGACGGGCG CGGCGTGCAC GTCCACGTCC CGGCGGGCGC GGTGCCCAAG
GACGGGCCCT CGGCGGGCGT CACGATGGTG TCGGCGCTCG CGTCGCTGCT GTCGGGCCGT
CCGGTGCGCT CGGACGTGGC GATGACCGGC GAGGTGTCCC TCACCGGACG GGTGCTGCCC
ATCGGAGGGG TGAAGCAGAA GCTGCTCGCC GCGCACCGGG CCGGGATCAC GACCGTGCTG
CTGCCCGCGC GCAACGGGCC GGACCTGGAG GAGGTCCCGC GGGACGTGCG GGACGCGCTG
ACCGTGCACC TGGTCGGGGA CGTGCGCGAG GTCCTGGAGC TGGCGCTGGA GCCCGAGGCG
GTGGCCGCGG CGGCGTGA
|
|---|
| Protein sequence | MGDTLALPVL PLDDTVVLPG MVVPVRLTGS DAGAEARAAV EAATSAAGGV NGARVLLVPR
LDGRYAKVGA LATVEQVGRL AGGERAAVLR ATERVRIGTG TTGPGAALWV EATVVEEPPP
DERARSLARD YRAVVTTILQ QRGAWQVVDS VRQVDGPSAL ADLAGYAPYL ENDQKVWLLE
TGDVGDRLER LLEWGRAHLA ELDVAESIAK DVKEGVEKQQ REFLLRQQLA AIRKELAELD
GKPATEEQDY RARVEAAELP EKVREAALRE VDKLERTSEQ SPEVGWIRTW LDTVLDLPWG
ERTEDSYDIA GARAVLDADH AGLDDVKERI TEYLAVRRRR ADRGMGLVGG RGGGAVLALV
GPPGVGKTSL GESVARAMGR KFVRVALGGV RDEAEIRGHR RTYVGALPGR IARAISEAGS
MNPVVLLDEI DKVGADHRGD PTAALLEVLD PAQNHTFRDH YLEVELDLSD VVFLATANVL
ESIPGPLLDR MELVRLDGYT EDEKVTIARD HLLPRQVERA GLEPGDVEVT GAALRRLAGE
YTREAGVRQL ERSLARVLRK VTAGVALDRA ELPVTVDGGD LEGYLKSPKF TPESAERTAV
PGVATGLAVT GAGGDVLFVE AALAEPGTGA GGVVLTGQLG EVMKESAQIA LSYLRAHDER
AATLDGRGVH VHVPAGAVPK DGPSAGVTMV SALASLLSGR PVRSDVAMTG EVSLTGRVLP
IGGVKQKLLA AHRAGITTVL LPARNGPDLE EVPRDVRDAL TVHLVGDVRE VLELALEPEA
VAAAA
|
|---|
| |