| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5853 |
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| Symbol | |
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| ID | 8330060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6890931 |
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| End bp | 6892436 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644946286 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003103509 |
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| Protein GI | 256379849 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCACCCG TGTCCCAGAG CCGTTCCGAG CGCCCGCAGT CCTCTCGCAG GCCCCGCAAG
CGCTCCGGCC AGGGCAACCG CCGTCCGCAG CACGTGGACG CGCCCCTCGC TTCCACCGTT
CCCGACCACG TCGAGAGCAC CCTCCCCGAA GGCCCGCTGC CCTCGTTCAG CGAGCTGGGC
CTGGCCGACG AGCTGGTCCG CGCGCTCGCC ACGGCCGGGA TCACCGAGCC GTTCCCCATC
CAGGCCGCGA CCCTGCCCGA CTCGCTCGCG GGTCGCGACC TGCTCGGCCG GGGCCAGACC
GGCTCCGGCA AGACCCTCGC GTTCGGCCTG GCGCTGCTGT CCAGGCTGGC CGGTGGCCGC
GCCAAGCCGC ACATGCCGCG CGCGCTGGTG CTGGTCCCCA CCCGTGAGCT GGCCATGCAG
GTCGAGGAGG CGCTGTCGCC CTTCGCCCGC GCCCTCGGCC TGTGGTGCCG CACCGTCGTG
GGCGGCACGT CCTTCCCGCG CCAGATCGAC GCGCTGCGCA GGGGCGTCGA CCTGCTGATC
GCCACGCCCG GTCGGCTCTC CGACCACGTG CGCCAGGGCA CCGCGGACCT GTCCGAGGTC
ATGTTCACCG CCCTGGACGA GGCCGACCAG ATGGCCGACA TGGGCTTCAT GCCGCAGGTG
CGGGCCATCC TGGACCTGAC CCCCGAGAAC GGGCAGCGGC TGCTGTTCTC CGCGACGCTC
GACGGCGACG TGGACAAGCT GGTCCGCCAG TACCTGCACG ACCCGGTCGT GCACTCGGTC
GCGCCGCCCA CCGGCAGCGT CACCACCATG GAGCACCACC TGCTGTTCGT GTCCGCCGAG
GACAAGCAGT CGGTCGTGAC CGAGGTGGCC GCGCGCGAGG GCCGCACGAT CATGTTCGTG
CGCACCAAGC ACCACGTGGA CCGGCTGGCC AAGAAGCTGC GGTCGATGGG CGTGCACGCC
GGCGCCCTGC ACGGCGGCAA GGCGCAGAGC GCGCGCACCC GCGTGCTCGG CCAGTTCCGC
GAGGGCACGA CCCCGGTCCT GATCGCCACG GACGTCGCCG CGCGCGGCAT CCACGTGGAC
GACGTCAGCC TGGTCGTGCA CGTGGACCCG CCCGCCGACC CGAAGGACTA CCTGCACCGC
GCCGGTCGCA CGGCGCGCGC CGGGCAGTCG GGCACGGTCG TCACGCTGGT CACGCACGAC
CAGCGGCGCG CCGTCCAGGG CCTGACCTCG CGCGCGGGCA TCCGCCCGGA GTCGACCAAG
GTCCGCCCCG GCGACGACGA GCTGATCCGC ATCACCGGCG CCCGCGAGCC CAGCGGCGTT
CCCGTGGTGG AGCCCGAGGT GCAGCCGCGC GGTCGTCGTG GTGGCGCGGG CGGCGGCGCG
GGCGCCCGTC GTGGCGGCGG CGGGTTCTTC CGCGGCGGTC GCGAGGGTGG CCGTGGCGAG
GGTGGCGGCC GTGACCGCGA CCGCGCGGGC GGCCGTCCCC GGCGCAGCGC GGCCCCGCAG
CACTGA
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| Protein sequence | MPPVSQSRSE RPQSSRRPRK RSGQGNRRPQ HVDAPLASTV PDHVESTLPE GPLPSFSELG
LADELVRALA TAGITEPFPI QAATLPDSLA GRDLLGRGQT GSGKTLAFGL ALLSRLAGGR
AKPHMPRALV LVPTRELAMQ VEEALSPFAR ALGLWCRTVV GGTSFPRQID ALRRGVDLLI
ATPGRLSDHV RQGTADLSEV MFTALDEADQ MADMGFMPQV RAILDLTPEN GQRLLFSATL
DGDVDKLVRQ YLHDPVVHSV APPTGSVTTM EHHLLFVSAE DKQSVVTEVA AREGRTIMFV
RTKHHVDRLA KKLRSMGVHA GALHGGKAQS ARTRVLGQFR EGTTPVLIAT DVAARGIHVD
DVSLVVHVDP PADPKDYLHR AGRTARAGQS GTVVTLVTHD QRRAVQGLTS RAGIRPESTK
VRPGDDELIR ITGAREPSGV PVVEPEVQPR GRRGGAGGGA GARRGGGGFF RGGREGGRGE
GGGRDRDRAG GRPRRSAAPQ H
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