Gene Amir_5849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5849 
Symbol 
ID8330056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6885718 
End bp6886485 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content76% 
IMG OID644946282 
Producthypothetical protein 
Protein accessionYP_003103505 
Protein GI256379845 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000227019 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGTGC TGCTGCCTCC GTCCGAGACC AAGGCGACCG GTGGGTCCGG CGCTCCCCTC 
GACCTGGACG CGCTGTCCCA CCGGGAGCTG AACCCGGTGC GCGACAAGCT CGTCACCGCG
CTGGTCGACC TGGCCGCCGA CGTGCCCGCG TCGCTGGCGG CCCTCGGCCT GTCGGAGCGG
CAGGCCGGGG AGGTGGGGCG GAACGCCGAG TTGCGCGCGT CGGCCACGAC GCCCGCGCTG
CGGCGGTACA CCGGCGTGCT CTACGACGCG CTGGACGTCC CGTCGCTGAC GAAGGCCGAG
CGCGACCGCG CGTTCGCCAG GATCGGCGTG GTGTCGGCGC TGTTCGGCCT GGTCGGGGCT
GGTGACGCGA TCCCGGCGTA CCGCCTGTCC GGCGGCAGCG CGCTGCCCGC GACCGGCCCG
CTCGGCGCGC TGTGGCGCCC CGCGCTGACC CCGGTCCTGG CGGAGGCCGA CGAGTTCGTC
GTGGACCTGC GCTCGGGCCC GTACGCGTCC CTCGCGAAGG CCCCCGCCGC CGTGGTGGTC
CGGGTGGTCA GCGACGACGG TTCGGGGCGG CGCAGGGCGG TGAGCCACTT CAACAAGGCC
CACAAGGGCC TGCTGGCACG CGCCCTGGTC CGCTCGCGCA CCGAGCCGTC GACGGTGGCC
GGGCTGGTGA AGGTCGCGGC GAGCGCCGGA CTCACGCTGG AGGAGACCGG GGCGAAGACC
CTGGACCTGG TGATCACCGG CAACCCCGCG GACAAGCCCG CGGCCTGA
 
Protein sequence
MLVLLPPSET KATGGSGAPL DLDALSHREL NPVRDKLVTA LVDLAADVPA SLAALGLSER 
QAGEVGRNAE LRASATTPAL RRYTGVLYDA LDVPSLTKAE RDRAFARIGV VSALFGLVGA
GDAIPAYRLS GGSALPATGP LGALWRPALT PVLAEADEFV VDLRSGPYAS LAKAPAAVVV
RVVSDDGSGR RRAVSHFNKA HKGLLARALV RSRTEPSTVA GLVKVAASAG LTLEETGAKT
LDLVITGNPA DKPAA