Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5849 |
Symbol | |
ID | 8330056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6885718 |
End bp | 6886485 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644946282 |
Product | hypothetical protein |
Protein accession | YP_003103505 |
Protein GI | 256379845 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000227019 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGTGC TGCTGCCTCC GTCCGAGACC AAGGCGACCG GTGGGTCCGG CGCTCCCCTC GACCTGGACG CGCTGTCCCA CCGGGAGCTG AACCCGGTGC GCGACAAGCT CGTCACCGCG CTGGTCGACC TGGCCGCCGA CGTGCCCGCG TCGCTGGCGG CCCTCGGCCT GTCGGAGCGG CAGGCCGGGG AGGTGGGGCG GAACGCCGAG TTGCGCGCGT CGGCCACGAC GCCCGCGCTG CGGCGGTACA CCGGCGTGCT CTACGACGCG CTGGACGTCC CGTCGCTGAC GAAGGCCGAG CGCGACCGCG CGTTCGCCAG GATCGGCGTG GTGTCGGCGC TGTTCGGCCT GGTCGGGGCT GGTGACGCGA TCCCGGCGTA CCGCCTGTCC GGCGGCAGCG CGCTGCCCGC GACCGGCCCG CTCGGCGCGC TGTGGCGCCC CGCGCTGACC CCGGTCCTGG CGGAGGCCGA CGAGTTCGTC GTGGACCTGC GCTCGGGCCC GTACGCGTCC CTCGCGAAGG CCCCCGCCGC CGTGGTGGTC CGGGTGGTCA GCGACGACGG TTCGGGGCGG CGCAGGGCGG TGAGCCACTT CAACAAGGCC CACAAGGGCC TGCTGGCACG CGCCCTGGTC CGCTCGCGCA CCGAGCCGTC GACGGTGGCC GGGCTGGTGA AGGTCGCGGC GAGCGCCGGA CTCACGCTGG AGGAGACCGG GGCGAAGACC CTGGACCTGG TGATCACCGG CAACCCCGCG GACAAGCCCG CGGCCTGA
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Protein sequence | MLVLLPPSET KATGGSGAPL DLDALSHREL NPVRDKLVTA LVDLAADVPA SLAALGLSER QAGEVGRNAE LRASATTPAL RRYTGVLYDA LDVPSLTKAE RDRAFARIGV VSALFGLVGA GDAIPAYRLS GGSALPATGP LGALWRPALT PVLAEADEFV VDLRSGPYAS LAKAPAAVVV RVVSDDGSGR RRAVSHFNKA HKGLLARALV RSRTEPSTVA GLVKVAASAG LTLEETGAKT LDLVITGNPA DKPAA
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