| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5847 |
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| Symbol | |
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| ID | 8330054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6882984 |
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| End bp | 6884729 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644946280 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_003103503 |
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| Protein GI | 256379843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0165369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCACGA GGATGTCGTC GCTGTTCCTG CGCACGCTGC GCGAGGACCC GGCCGACGCC
GAAGTCCCGA GCCACAAGCT GCTGGTCCGC GCGGGCTACG TGCGGCGCGT CGCGCCGGGC
GGCTACTCGT GGCTGCCGCT GGGCCTGAGG GTGCTGCGCA ACATCGAGCG GGTCGTGCGC
GAGGAGATGG ACGCGATCGG CGCGCAGGAG ATCCAGTTCC CCGCGCTGCT CCCCAAGGAG
CCCTACGAGG CCACCAACCG GTGGACCGAG TACGGCCCCA ACATCTTCCG CCTCAAGGAC
CGCAAGGGCG CCGACTACCT GCTCGGCCCC ACCCACGAGG AGCTGTTCGC GCTCACCGTG
AAGGGCGAGT ACAGCTCGTA CAAGGACTAC CCGGTCGCGC TCTACCAGAT CCAGACCAAG
TACCGCGACG AGGCGCGCCC CCGCGCGGGC ATCCTGCGCG GTCGCGAGTT CGTCATGAAG
GACTCGTACT CCTTCGACCT CACCGACGAG GGCCTGGCCG AGGCGTACCA GCGCCACCGC
GCCGCCTACA TCAAGATCTT CGACCGGCTC GGCATGGACT ACGTCATCGT GTCCGCGACC
TCCGGCGCGA TGGGCGGCTC GGCGTCCGAG GAGTTCCTGG CGGTCGCCCC GAACGGCGAG
GACACCTTCG TCCGCAGCAC CGAGTCCGAC TACGCGGCCA ACGTCGAGGC CGTCACCACC
CCCGCGCCCC CCGCGCAGCC GGTCGAGGGC CGCCCCGAGG CGCAGGTGCA CAGCACGCCC
GCGACCCCGA CCATCGACAC CCTGGTCGAG TTCTTCAACA ACGCGGGCCT CGGCCGCGAG
TTCACCGCCG CCGACACCCT GAAGAACGTG CTGGTCAAGA CCCGCGTCCC CGGTTCCGAC
TGGGAGCTGC TGGCGATCGG CCTCCCCGGC GACCGCGAGG TCGACCTCAA GCGCCTGGAG
GCGGCCGTCG AGCCCGCCGA GGTCGCCATG CTGGACGAGG CCGACTTCAA GGCCCACCCC
TTCCTGGTCA AGGGCTACAT CGGTCCCGGC GCGCTGCTGG CGAACGAGGT CCGCTACCTG
GTCGACCCGC GCGTCGTCGA GGGCACCGCC TGGGTGACCG GCGCCGACCA GCACGAGCAC
CACGTCGTGG ACCTGCTCTG CGGTCGCGAC TTCACCCCGG ACGGCACGAT CGACGTCGCC
GAGGTCCGCG AGGGCGACCC GTCGCCCGAC GGCAAGGGCG TCCTGGTGGC CGCGCGCGGC
ATCGAGATCG GCCACATCTT CCAGCTCGGC CGCAAGTACG CCGACGCGTT CTCGCTCGAC
GCCCTCGGCC CGGACGGCAA GCCCGTGCGC ATCACCATGG GCTCCTACGG CATCGGCGTG
TCCCGCCTGG TCGCCGCGAT CGCCGAGCAG AGCCACGACG ACCGCGGCCT GATCTGGCCG
CGCAACGTCG CCCCCGCCGA CGTGCACGTG GTCGTCGCGG GCAAGGACGC CACCCTCCTG
GAGGGCGGCG AGAAGCTCGC GGGCGAGCTG TCCTCGGCGG GCCTGAGCGT GCTGCTGGAC
GACCGCAAGG CCAGCCCCGG CGTGAAGTTC GCCGACGCCG AGCTGGTGGG CGTGCCCACG
ATCCTCGTGG TCGGCCGCGG CCTGGCCAGC GGTCTGGTCG AGGTCAAGGA CCGCCGCTCC
GGCGAGCGCG TCGAGGTGCC GGTCGACGAG GCCGTGCAGC ACGTGCTGGC CGTCGCGCGC
GGCTGA
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| Protein sequence | MITRMSSLFL RTLREDPADA EVPSHKLLVR AGYVRRVAPG GYSWLPLGLR VLRNIERVVR
EEMDAIGAQE IQFPALLPKE PYEATNRWTE YGPNIFRLKD RKGADYLLGP THEELFALTV
KGEYSSYKDY PVALYQIQTK YRDEARPRAG ILRGREFVMK DSYSFDLTDE GLAEAYQRHR
AAYIKIFDRL GMDYVIVSAT SGAMGGSASE EFLAVAPNGE DTFVRSTESD YAANVEAVTT
PAPPAQPVEG RPEAQVHSTP ATPTIDTLVE FFNNAGLGRE FTAADTLKNV LVKTRVPGSD
WELLAIGLPG DREVDLKRLE AAVEPAEVAM LDEADFKAHP FLVKGYIGPG ALLANEVRYL
VDPRVVEGTA WVTGADQHEH HVVDLLCGRD FTPDGTIDVA EVREGDPSPD GKGVLVAARG
IEIGHIFQLG RKYADAFSLD ALGPDGKPVR ITMGSYGIGV SRLVAAIAEQ SHDDRGLIWP
RNVAPADVHV VVAGKDATLL EGGEKLAGEL SSAGLSVLLD DRKASPGVKF ADAELVGVPT
ILVVGRGLAS GLVEVKDRRS GERVEVPVDE AVQHVLAVAR G
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