Gene Amir_5846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5846 
Symbol 
ID8330053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6882225 
End bp6882914 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content75% 
IMG OID644946279 
ProductHaloacid dehalogenase domain protein hydrolase 
Protein accessionYP_003103502 
Protein GI256379842 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0126424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGACCC TCGTGCTGTG GGACATCGAC CTGACCCTGA TCGACGCCTC GGGGCTCGGC 
CACGCCTGGT ACGGGACCGC GCTGCGGACG GTGTCCGGGC TGGAGCTGGT GCACCGGCCC 
TCGTACGCCG GGCGGACCGA GCGGGCGATC AGCAGGCAGC TGCTGCTCTC GCACGACCTG 
GAGGCCACCG ACGAGCTGAT CTCCCGGCTG CACGCCGAGC TGGTCGCGGT GGCGCGGCTG 
GAGCACGGGC GGCTGGCCGA GCGCGGGCGC GCGCTGCCCG GTGCGGCGGC GGTGCTGGAG 
GCGCTGGCGG GCGAGCCGGG CGTGGTGCAG TCGCTGGTGA CCGGGAACCT GGTGGAGATC 
GCCCGGTACA AGCTGGCGGC GTTCGAGCTG GAGAAGCACC TGGACTTCGC CATCGGCGGG 
TTCGGCGAGC TGTCCGACGA CCGGCCCGAC CTGGTGCGCG AGGCGGTGCG GCTGGCGACG 
GCCAAGCACG GCGTGGCCCC GGAGTCGGTC GTGGTCGTCG GGGACACCCC GCACGACGTG 
GACGCGGCGC TGCACCACGG GTACCGGGCG GTCGCGGTGG CGACCGGGCG CAGCGACGTC 
GCGGAGCTGG AGGCGTCCGG GGCGCACGCG GTGCTGGTGG ACCTGTCGGA CACCGCCGAC 
GTGGTGGACG TGCTGCTCGG CAGGCGCTGA
 
Protein sequence
MKTLVLWDID LTLIDASGLG HAWYGTALRT VSGLELVHRP SYAGRTERAI SRQLLLSHDL 
EATDELISRL HAELVAVARL EHGRLAERGR ALPGAAAVLE ALAGEPGVVQ SLVTGNLVEI 
ARYKLAAFEL EKHLDFAIGG FGELSDDRPD LVREAVRLAT AKHGVAPESV VVVGDTPHDV 
DAALHHGYRA VAVATGRSDV AELEASGAHA VLVDLSDTAD VVDVLLGRR