| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5834 |
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| Symbol | |
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| ID | 8330041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6870713 |
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| End bp | 6873817 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644946268 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_003103491 |
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| Protein GI | 256379831 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGGCA AGGCCCGCGT GCACGAGCTC GCCAAAGAGC TCGGTGTCAC GAGCAAGGAA
CTGATGACCA CGCTCGCCAG TCAGGGCGAG TACGTGAAGT CCGCGTCCAG CACCGTCGAG
GCGCCGGTGG CGCGACGACT GCGCGACGCG CACGCCAAGG GCGAGGGCAA GAAGCCGTCT
TCCGGCGCCC GCCCCTCGGC CCCCAAGCCG CAGGCCCCGT CCGCCCCCCA GGGCGGCTCC
GAGGCCCCGC GTCCCTCCAT GCCCATGGGC AAGCCCGGTC CGCGCCCCGT GCCCGGCCCG
CGCCCCCAGG CGCCCAAGCC GCAGACCCCG GCGAAGCCGG CTGCGGCCGA GCAGGCCCCC
CAGGCCCCGG CGGCGACCCC GGTCGCCCCG GCTCCGGCCG CGCAGGCCGC TCCGGCTCCG
GCCGCGCAGG CCCCCAAGGC CCCGGCGGCT CCGGCCGCCG AGCGCCAGCA GGGTCCGCGC
CCGGCGTCCG GCCCGCGTCC CGGCCCCAGG CCCGGCCCGC GCCAGCAGCC CCAGCAGCAG
CAGCCCGCGG CTGCCGCCGA GAACCCCTCG GTGGTGCCGC CCAGGCCGCA GTCCCCGAAG
CCGCAGGGCC CGCGCGGCCC CCGTCCGGGC AACAACCCGT TCGGTGTCGG CGGCGGCGCC
CCCGCCCCCC GTCCGCAGGC CCCGCGCCCG CAGGGCGGTC CCGGTGGCGG CGAGCGCGGC
GACCGCGGCT CCAAGCCCGG TGACCCGCGT CCCGGCGGCC CGCGTCCGGC CGGTCCCCGT
CCCGGCGGTT CCGCCGGTTC CGGCGGCCCG CGCCCGAACC CCGGCAACAT GCCTCCCCGC
CCGAACCCCG GCATGATGCC GGGCCGGTCG GCCGCGCCCC GCCCCGGTGG CGGCGGCGGT
GGTCGTCCCG GCGGCGGTCC CGGTGGCGGC GGTCGCGGCC CCGGTGGCGG CGGCGGTGGC
GGTGGCTTCC GCGGCGGTGG CGGCGGTGGC GGTGGCGGCG GCTTCCGCGG CGGCGGTGGC
GGCGGCGGCG GTGGCGGCTT CCGCCCCGGC GGCGGCGGCC CCGGTGGCGG TGGCGGCGGT
GGCGGCTTCC GCCCCGGCGG CGGCGGTGGC GCCCCGGCCG GTGGTGGCGG CGGTGGCTTC
CGCGGTCGTC CCGGTGGCGG TGGCCCCGGT GGCCGTGGCG GCACGGCAGG CGCGTTCGGC
CGTCCCGGCG GTCCTGCGCG TCGTGGACGC AAGTCCAAGC GCCAGAAGCG CCAGGAGTAC
ATGGACAACA TGCAGGCGCC TTCGGTTGGT GGCGTCCGTC TGCCCAAGGG CAGCGGCGAG
ACCATCCGGC TGCCTCGTGG CGCCTCGCTG ACCGACTTCG CCGACAAGAT CAACGCCAAC
CCGGCCTCGC TGGTGCAGGT GCTGTTCCAC CTCGGCGAGA TGGTCACCGC GACGCAGTCC
GTCTCCGACG AGATCCTGGA GCTGCTCGGC TCCGAGATGA ACTACGTCGT GCAGGTCGTG
TCCCCCGAGG AGGAGGACCG CGAGCTGCTC GAGACGTTCG ACATCACCTA CGGCGAGGAC
GCGGGCGGCG AGGACGACCT GGCCATCAGG CCCCCGGTCG TCACCGTCAT GGGTCACGTC
GACCACGGCA AGACCCGCCT CCTCGACACC ATCCGCAAGA CGAAGGTGGC CGAGGGCGAG
GCCGGCGGCA TCACGCAGCA CATCGGCGCG TACCAGGTGC AGACCGAGCT GGAGGGCAAC
CCCCGGCTCA TCACCTTCAT CGACACGCCG GGTCACGAGG CGTTCACCGC CATGCGTGCC
CGTGGCGCGA ACTCCACCGA CATCGCGGTC ATCGTGGTGG CGGCGGACGA CGGCGTCATG
CCGCAGACGG TCGAGGCGAT CAACCACGCC CAGGCGGCGA ACGCCCCGAT CGTGGTCGCG
GTCAACAAGA TCGACAAGGA GGGGGCCAAC CCCGCCAAGA TCCGCCAGCA GCTCACCGAG
TACGGGCTGG TCGCCGAGGA GTACGGCGGC GACACCATGT TCGTCGACAT CTCGGCGAAG
CAGGGCGTCA ACATCGACGG CCTGCTGGAG GCGATCCTGC TGACCGCGGA CGCCTCGCTG
GACCTGCGTG CCAACCCCGG CATGGAGGCC CAGGGCGTCG CGATCGAGGC GCACCTGGAC
CGCGGTCGCG GCCCGGTCGC CACGGTGCTG GTGCAGCGCG GCACGCTGCG GGTCGGCGAC
TCGATCGTCG CCGGCGACGC GTACGGCCGC GTCCGCCGCA TGGTGGACGA GCACGGCGAC
GACGTCACCG AGGCGTACCC GTCGCGGCCG GTGCTGGTCA TCGGTCTGAC CTCGGTCCCG
AGGGCGGGCG ACACCTTCCT CGTGGTCGAG GAGGACCGGG TCGCCCGGCA GATCGCCGAG
CGCCGCCAGG CCCGCACGCG GAACGCGCTC AACGCGGCCC GCCGCAAGCG CGTCAGCCTG
GAGGACCTGG ACGCCGCGCT GAAGGAGACC AGCCAGCTCA CGCTGATCAT CAAGGGCGAC
AACTCCGGTA CCGTCGAGGC GCTGGAAGAC GCTCTGATGA AGATCGAGGT CGGCGACGAC
GTCGAGCTGC GGGTCATCCA CCGGGGCGTC GGTGGCATCA CCGAGGGCGA CATCAACCTC
GCCGTCGCCG GTTCCGCCAT CGTCCTGGGC TTCAACGTCC GGGCCGAGGG CAAGGCCACC
GAGCTGGCCA ACCGCGAGGG CGTCGACGTC CGCTACTACA CGGTGATCTA CCAGGCGATC
GACGAGATCG AGCAGGCCCT CAAGGGCATG CTCAAGCCGG AGTACGAAGA GGTCCAGCTG
GGCCGCGCCG AGGTCCGCGA GGTCTTCAAG TCCTCCAAGG TCGGCACGAT CGCCGGTTGC
CTCGTCCTCT CGGGCGAGAT CCGCCGCAAC GCCCGTGCCC GCCTGCTGCG CGACAACAAC
GTCATCCAGG AGAGCCTGCC GATCAGCTCG CTGCGGCGGT TCAAGGACGA CGCGACCGAG
GTCCGCGAGG GCTACGAGTG CGGTCTGACG CTCGGCAACT ACGGCGATCT CAAGATCGGC
GACGTGATCG AGACGTTCGA GATGCGCGAG AAGCCGCGCG CCTGA
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| Protein sequence | MAGKARVHEL AKELGVTSKE LMTTLASQGE YVKSASSTVE APVARRLRDA HAKGEGKKPS
SGARPSAPKP QAPSAPQGGS EAPRPSMPMG KPGPRPVPGP RPQAPKPQTP AKPAAAEQAP
QAPAATPVAP APAAQAAPAP AAQAPKAPAA PAAERQQGPR PASGPRPGPR PGPRQQPQQQ
QPAAAAENPS VVPPRPQSPK PQGPRGPRPG NNPFGVGGGA PAPRPQAPRP QGGPGGGERG
DRGSKPGDPR PGGPRPAGPR PGGSAGSGGP RPNPGNMPPR PNPGMMPGRS AAPRPGGGGG
GRPGGGPGGG GRGPGGGGGG GGFRGGGGGG GGGGFRGGGG GGGGGGFRPG GGGPGGGGGG
GGFRPGGGGG APAGGGGGGF RGRPGGGGPG GRGGTAGAFG RPGGPARRGR KSKRQKRQEY
MDNMQAPSVG GVRLPKGSGE TIRLPRGASL TDFADKINAN PASLVQVLFH LGEMVTATQS
VSDEILELLG SEMNYVVQVV SPEEEDRELL ETFDITYGED AGGEDDLAIR PPVVTVMGHV
DHGKTRLLDT IRKTKVAEGE AGGITQHIGA YQVQTELEGN PRLITFIDTP GHEAFTAMRA
RGANSTDIAV IVVAADDGVM PQTVEAINHA QAANAPIVVA VNKIDKEGAN PAKIRQQLTE
YGLVAEEYGG DTMFVDISAK QGVNIDGLLE AILLTADASL DLRANPGMEA QGVAIEAHLD
RGRGPVATVL VQRGTLRVGD SIVAGDAYGR VRRMVDEHGD DVTEAYPSRP VLVIGLTSVP
RAGDTFLVVE EDRVARQIAE RRQARTRNAL NAARRKRVSL EDLDAALKET SQLTLIIKGD
NSGTVEALED ALMKIEVGDD VELRVIHRGV GGITEGDINL AVAGSAIVLG FNVRAEGKAT
ELANREGVDV RYYTVIYQAI DEIEQALKGM LKPEYEEVQL GRAEVREVFK SSKVGTIAGC
LVLSGEIRRN ARARLLRDNN VIQESLPISS LRRFKDDATE VREGYECGLT LGNYGDLKIG
DVIETFEMRE KPRA
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