| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5830 |
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| Symbol | |
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| ID | 8330037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6867439 |
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| End bp | 6868743 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644946264 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003103487 |
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| Protein GI | 256379827 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0799038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGGTCG AACGGGTTCC AGCGCGCAGG GTCGTCGGGC TCGCCGCGCC CGCGCTGGTG
GTGCTGGCGG CCGAGCCGCT CTACGTGCTG GTGGACACGG CCGTCGTCGG CCACCTCGGC
GCGCTGCCCC TGGCGGGCCT GGCGCTGGGC GGCGTGCTGT TCACCCAGGT CGCCACGCAG
CTGACGTTCC TGTCCTACGG CACCACCGCG CGCACCGCCC GGCTGTTCGG CGCCGGTCGC
CGCGCGGAGG CGGTGGCCGA GGGCGTGCAG GCGACCTGGC TGGCGCTGGC CGTGGGCGCG
CTGGTGATCG TGCTGGGGCA GCTGCTCGCC GGGCCCGCCA CGCGCCTGCT GGTCGGCGAC
GAGGTCGTCG CGGCCGAGGC GGTGTCGTGG CTGCGGATCG CCCTGTTCGG CGCGCCGATG
GTGCTCGTGA CGATGGCGGG CAACGGCTGG ATGCGCGGGG TCCAGGACAC CCGCCGCCCG
CTGCGGTACG TGCTGTTCGG CAACGCGGTG TCGGCGGTGC TGTGCCCGCT GCTGGTGCAC
ACCGCCGGGT GGGGACTTGA GGGCTCGGCG GTGGCGAACG TGGTCGCCCA GCTGCTGTCC
GCCGGGCTGT TCCTGCGCGC GCTGGTGGTG GAGCGGGTGC CGCTGCGGCC TGTGCCCGCG
CTGATGCGCG CCCAGCTCGG CATGGGCCGC GACCTGGTGC TGCGCAGCCT GGCGTTCCAG
GCGTGCTTCC TGTCCGCGGC GTCGGTGGCC GCCCGCACCT CGGTCGCCGC CGTCGGCGCG
CACCAGGTGG TGCTCCAGCT GTGGACGTTC CTGGCGCTCG TGCTGGACTC GCTGGCCATC
GCCGCCCAGT CGATCGTGGG CGCGTTCCTC GGCGCGGACC GGCGCGAGGA CGCGAAGGGC
TTCGCGCGGC AGGTCACCGG GTACGGGCTG GTGTTCGGCT CGTGCCTCGG GGTGCTGTTC
GCCGCGCTCT CCGGGGTGAT CCCCGGCCTG TTCACCGGGG ACGCGGGCGT GCTGGGGGAG
ATCCCGAACG CCTGGTGGTT CTTCGTGGCG CTCCAGCCGA TCGCCGGGGT GGTGTTCGCG
CTCGACGGGG TGCTGCTGGG CGCGGGCGAC GCGGCGTTCC TGCGCACCGC GACGCTGCTG
TCGGCCGCCG CCGGGTTCCT GCCGCTGATC TGGCTGAGCC TGGCGTTCGG GTGGGGCCTC
TCGGGGATCT GGACGGGGCT GTCCGCGTTC ATGGCGCTGC GCCTGGTGGC GGTGGTGCTG
CGGACCCGCT CCGGCAGGTG GGCGGTTCCC GGCGCGGCCG TGTGA
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| Protein sequence | MVVERVPARR VVGLAAPALV VLAAEPLYVL VDTAVVGHLG ALPLAGLALG GVLFTQVATQ
LTFLSYGTTA RTARLFGAGR RAEAVAEGVQ ATWLALAVGA LVIVLGQLLA GPATRLLVGD
EVVAAEAVSW LRIALFGAPM VLVTMAGNGW MRGVQDTRRP LRYVLFGNAV SAVLCPLLVH
TAGWGLEGSA VANVVAQLLS AGLFLRALVV ERVPLRPVPA LMRAQLGMGR DLVLRSLAFQ
ACFLSAASVA ARTSVAAVGA HQVVLQLWTF LALVLDSLAI AAQSIVGAFL GADRREDAKG
FARQVTGYGL VFGSCLGVLF AALSGVIPGL FTGDAGVLGE IPNAWWFFVA LQPIAGVVFA
LDGVLLGAGD AAFLRTATLL SAAAGFLPLI WLSLAFGWGL SGIWTGLSAF MALRLVAVVL
RTRSGRWAVP GAAV
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