Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5777 |
Symbol | |
ID | 8329984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6812000 |
End bp | 6813289 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644946213 |
Product | protein of unknown function DUF58 |
Protein accession | YP_003103436 |
Protein GI | 256379776 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.391324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGGGG CGCTGTCGGG GCTGACCACG CGCGGGCGCT GCCTGCTGGC CGCCGGGTTC ACGGCGGGGG TGTGCGCGTG GGTACTGGAC GAGCGGGACC TGCTGCGGGT GGCCGTGTTC GTGGTGGCGA TGCCGCTGCT GGCGGCGTGG CTGGCGCAGC GGGCCCGCGT GGGTCTGCGC GCGGCGCGGT CGGTGGACCC GGCGCGGGTG CCGGTGGGCG CGGTGGCCGA GGTCAGGGTG GAGCTGCGCA GCGCGGGCAG GCTGCCCACG GGCGGGCTGC TGCTGGAGGA CGCGGTGCCG TACGCGCTGG GCAGCAGGCC GAGGTTCGTG GTGGAGCGGT TGCCGCGCGA CCACCGGACG TCGCTGCGCT ACCAGCTCAA GCCGGTGATG CGCGGGGTGC AGCAGGTGGG TCCGCTGCTG GCCAGGGTCA CCGACCCGTT CGGGCTCGCC GAGTTCGACC AGGAGATGGC GGGGCGGACC AGGCTGGTGG TGGTGCCGAG GGTGGTGCGG CTGTCCGGGC TGCCCGGCGG GTCCGGCATG GGCTCGGGCG ACGACGGGTC GATCCGGCTG CGCACCGGGC AGGGCGAGGA CGACGCGGTG GTGCGGCCGT ACCGGCACGG CGACGACCTG CGGAAGGTGC ACTGGCGCTC GACCGCACGG CGGGACGAGT TGATGGTGCG GGTGGAGGAG CGGCCCTGGC GCGGCGGCAC CACGGTGCTG CTCGACCACC GGCTGGCCGC GCACCGGGGC AGCGGGCCGT CGGCGAGCCT GGAGTGGGCG GTGTCGTTCG CGGCGTCGGT GTGCCTGCAC CTGAACCGGT TCGGGCACCA GGTGAAGCTG GTCGGCGACG ACGGCCGGGT GCTGGCGGGG GTGACGGGCG ACGCCGGGCA CGGCGACGAC GTGGTGCTGG ACTCGCTGGC GGCGCTCCAG CCGTCGCACC GGTTGGAGCT GGCGGCCGGG TTGGACGCGG GCGCGGGCCA GGAGGTGGTG GCGCTGCTGG GCGCGTGCTC GCCGGAGGCG GCCGAGTCGC TGGCCAGGCA CCGCAGGCGC GGGACGCGCA GCCTCGCGGT GGTGCTGGAC GTGGCGGCGT GGGCCGGGGC GCGGGAGAAC GCGGCGGTCA GCGCGGCGGG CCCCGCGGGT GCGGCGGCGG CGTCGGCCGA GGACACGGCC AGGGTGCTCA GCGCCTCGGG GTGGGGCGTG GTGGTGGCGA CTCCCGCCAC GCCGATGGAC CAGGTGTGGC AGGAGCTGTG CCACAGCGCG GGCAACCGCG GTCGCGCGGA GGTGGGCTAG
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Protein sequence | MAGALSGLTT RGRCLLAAGF TAGVCAWVLD ERDLLRVAVF VVAMPLLAAW LAQRARVGLR AARSVDPARV PVGAVAEVRV ELRSAGRLPT GGLLLEDAVP YALGSRPRFV VERLPRDHRT SLRYQLKPVM RGVQQVGPLL ARVTDPFGLA EFDQEMAGRT RLVVVPRVVR LSGLPGGSGM GSGDDGSIRL RTGQGEDDAV VRPYRHGDDL RKVHWRSTAR RDELMVRVEE RPWRGGTTVL LDHRLAAHRG SGPSASLEWA VSFAASVCLH LNRFGHQVKL VGDDGRVLAG VTGDAGHGDD VVLDSLAALQ PSHRLELAAG LDAGAGQEVV ALLGACSPEA AESLARHRRR GTRSLAVVLD VAAWAGAREN AAVSAAGPAG AAAASAEDTA RVLSASGWGV VVATPATPMD QVWQELCHSA GNRGRAEVG
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