Gene Amir_5759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5759 
Symbol 
ID8329966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6788980 
End bp6789666 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content76% 
IMG OID644946195 
Productprotein of unknown function DUF152 
Protein accessionYP_003103418 
Protein GI256379758 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.75056 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACCC GCGAAGGCGG CGTCTCCAAG GCGCCCTACG ACTCGTTCAA CCTCGGTGAC 
CACGTCGGGG ACGACCCTGA GGCGGTCGGG GCCAACCGGG TCCGGCTCGC CGAGGGGATC
GGGGTCCCCG TCACCGACCT GGTCTGGATG GAGCAGGTGC ACGGGCGCAC CGTCGCCGTG
GTCGACGGGC CGCAGGGCGG TCCGCTGGAG GCCACCGACG CGGTCGTCAC CACCCGGCCC
GGCCTGGCGC TGGCCGTGCT CACCGCCGAC TGCGTGCCGG TCCTCCTCGG CGACCCGGTC
GCCGGGGTCG CCGCCGTGGC CCACGCGGGT CGGGTCGGGG CTCGGGTCGG CATCGTGCCC
GCCGTGCTCA AGGCCATGGC CGAGGCGGGG GCGACGCCGG AGAACACCGA GGTCCTGCTC
GGCCCGGCGG TGTGCGGGGA CTGCTACGAG GTGCCCGCCG ACATGCGCGC CGACGTCGAC
AAGCACCTGC CCGGCAGCGC GGCCAAGTCC CGAGCGGGCA AGCCCTCGCT CGACCTGCGC
GCGGGCATCT GGAACCAGCT CGCCGCCGCG GGCGTGGGCA GGATCGGCGT CGACCCGCGC
TGCACCGTCG AGGAGCGCGC CCTGTTCAGC CACCGCCGCA CCCCCGGCAC CGGCCGCCTC
GCCTCCGTCG CCTGGATCGA GCCGTGA
 
Protein sequence
MTTREGGVSK APYDSFNLGD HVGDDPEAVG ANRVRLAEGI GVPVTDLVWM EQVHGRTVAV 
VDGPQGGPLE ATDAVVTTRP GLALAVLTAD CVPVLLGDPV AGVAAVAHAG RVGARVGIVP
AVLKAMAEAG ATPENTEVLL GPAVCGDCYE VPADMRADVD KHLPGSAAKS RAGKPSLDLR
AGIWNQLAAA GVGRIGVDPR CTVEERALFS HRRTPGTGRL ASVAWIEP