Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5759 |
Symbol | |
ID | 8329966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6788980 |
End bp | 6789666 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644946195 |
Product | protein of unknown function DUF152 |
Protein accession | YP_003103418 |
Protein GI | 256379758 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.75056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACCC GCGAAGGCGG CGTCTCCAAG GCGCCCTACG ACTCGTTCAA CCTCGGTGAC CACGTCGGGG ACGACCCTGA GGCGGTCGGG GCCAACCGGG TCCGGCTCGC CGAGGGGATC GGGGTCCCCG TCACCGACCT GGTCTGGATG GAGCAGGTGC ACGGGCGCAC CGTCGCCGTG GTCGACGGGC CGCAGGGCGG TCCGCTGGAG GCCACCGACG CGGTCGTCAC CACCCGGCCC GGCCTGGCGC TGGCCGTGCT CACCGCCGAC TGCGTGCCGG TCCTCCTCGG CGACCCGGTC GCCGGGGTCG CCGCCGTGGC CCACGCGGGT CGGGTCGGGG CTCGGGTCGG CATCGTGCCC GCCGTGCTCA AGGCCATGGC CGAGGCGGGG GCGACGCCGG AGAACACCGA GGTCCTGCTC GGCCCGGCGG TGTGCGGGGA CTGCTACGAG GTGCCCGCCG ACATGCGCGC CGACGTCGAC AAGCACCTGC CCGGCAGCGC GGCCAAGTCC CGAGCGGGCA AGCCCTCGCT CGACCTGCGC GCGGGCATCT GGAACCAGCT CGCCGCCGCG GGCGTGGGCA GGATCGGCGT CGACCCGCGC TGCACCGTCG AGGAGCGCGC CCTGTTCAGC CACCGCCGCA CCCCCGGCAC CGGCCGCCTC GCCTCCGTCG CCTGGATCGA GCCGTGA
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Protein sequence | MTTREGGVSK APYDSFNLGD HVGDDPEAVG ANRVRLAEGI GVPVTDLVWM EQVHGRTVAV VDGPQGGPLE ATDAVVTTRP GLALAVLTAD CVPVLLGDPV AGVAAVAHAG RVGARVGIVP AVLKAMAEAG ATPENTEVLL GPAVCGDCYE VPADMRADVD KHLPGSAAKS RAGKPSLDLR AGIWNQLAAA GVGRIGVDPR CTVEERALFS HRRTPGTGRL ASVAWIEP
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