| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5746 |
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| Symbol | |
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| ID | 8329953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6774660 |
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| End bp | 6775592 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644946183 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003103406 |
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| Protein GI | 256379746 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGCG ACTACCGGAC CCTCCCCGTC CCCGACGGCC TCGACGGGAT GCGCGTCGAC
GCGGGTCTCG CCAAGCTCCT CGGGCTCTCC CGAACGGTCA TCGCCTCGCT GGCCGAGAGC
GGCGACGTCG TGCTCGACGG CCGCGTCGCG GGCAAGTCGG ACCGCCTGGT GGCGGGCTCC
TGGCTGGAGC TGACCCTGCC CGAGCCCGAG CGGCCCGTGC AGGTGCAGGC CGTGCCGGTC
GAGGGCATGA TCGTCCTGCA CGAGGACGAC GACGTGATCG TCGTCGACAA GCCCGTCGGC
GTGGCCGTGC ACCCCTCGCC CGGCTGGACC GGCCCGACCG TGGTCGGCGG GCTCGCCGCC
GCGGGCGTGC GCGTGTCCAC CTCCGGCGCG GCCGAGCGGC AGGGCGTGGT GCACCGGCTC
GACGTCGGCA CCACCGGCGT CATGGTCGTG GCCAAGAGCG AGCACGCCTA CTCGGTGCTC
AAGCAGGCGT TCAAGGACCG CACGGTCGAC AAGCTGTACC ACGCGCTGGT GCAGGGCCAC
CCGGACCCGA TCAAGGGCAC CATCGACGCC CCCATCGACC GGCACCCCAA GCACGACTAC
AAGTTCGCGG TGATGGCGGG CGGCAAGCCC AGCATCACGC ACTACGAGGT CGTCGAGGCG
TTCCGCGCCG CGTCGCTGCT GGACGTGCAC CTGGAGACCG GGCGCACCCA CCAGATCCGG
GTGCACTTCT CCGCGCTCAA GCACCCGTGC GTGGGCGACC TGACCTACAC CGCCGACCCG
GTGCTCGCCA AGCGGCTGGG CATGTCCCGG CAGTGGCTGC ACGCCCGCAG GCTGGGCTTC
CACCACCCCG CCGACGGGGA GTGGGTCGAG TTCACCAGCG AGTACCCGGA CGACCTCGAC
CACGCGCTCA AGCTGCTGCG CTCCGAGAGC TGA
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| Protein sequence | MSGDYRTLPV PDGLDGMRVD AGLAKLLGLS RTVIASLAES GDVVLDGRVA GKSDRLVAGS
WLELTLPEPE RPVQVQAVPV EGMIVLHEDD DVIVVDKPVG VAVHPSPGWT GPTVVGGLAA
AGVRVSTSGA AERQGVVHRL DVGTTGVMVV AKSEHAYSVL KQAFKDRTVD KLYHALVQGH
PDPIKGTIDA PIDRHPKHDY KFAVMAGGKP SITHYEVVEA FRAASLLDVH LETGRTHQIR
VHFSALKHPC VGDLTYTADP VLAKRLGMSR QWLHARRLGF HHPADGEWVE FTSEYPDDLD
HALKLLRSES
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