Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5705 |
Symbol | |
ID | 8329912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6735739 |
End bp | 6736401 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644946143 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003103366 |
Protein GI | 256379706 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTGCGG TGGACGGCGG TGAGCCGAAG CGCCGGGGAC GGCGCGCGGG CGGCGAGGAC ACCAGGGGCG CGCTGCTCCA GGCGGCGCGC GAGGTGTTCG TCGAGCGCGG CTACGAGGGC GCGACGGTGC GGGCCATCGC GGCGCGCGCG GGCGTGGACG CCGCGATGGT CAACCACTGG TTCGGCGGCA AGCAGGCGCT GTTCGCGAAG GCCGTGCTGC AGCTGCCCGT CGACCCGGTG GAGATCGTCC GCCGGATCGC CCAGGGCCCG CCCGAGCTGC TGGGCGAGCG CCTGGTGCGC ACGTTCCTCG GGGTGTGGGA CGCCACCGGC GGCGGCGCGT TCTCCGCGCT GGTGCGCAGC GTCGCCGGGC ACGAGCAGGT CACCCACGCC CTGCACGACC TGTTCATCAA GACCGTGCTG GGCCAGGTGA TGCGGGCGTT CGACGTGGAC CGGCCCGAGC TGCGCGCCAC GCTGTGCGCC TCGCAGATGG TCGGTCTCGG CATGACGCGG TACGTGCTGG AGTTCGAGCC GCTGGCGTCG GCCGACCCCG AGGCGCTGGT CTCGGCGGTC GGGCCGACGC TCCAGCGCTA CCTGTCCGGC GACATCGGCT CAGTCGACAT CGGCTCCGGC GGCATCAGCG AGGTCGCGTC GAAGCAGGTG TGA
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Protein sequence | MVAVDGGEPK RRGRRAGGED TRGALLQAAR EVFVERGYEG ATVRAIAARA GVDAAMVNHW FGGKQALFAK AVLQLPVDPV EIVRRIAQGP PELLGERLVR TFLGVWDATG GGAFSALVRS VAGHEQVTHA LHDLFIKTVL GQVMRAFDVD RPELRATLCA SQMVGLGMTR YVLEFEPLAS ADPEALVSAV GPTLQRYLSG DIGSVDIGSG GISEVASKQV
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