| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5692 |
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| Symbol | |
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| ID | 8329899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6716066 |
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| End bp | 6717568 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644946130 |
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| Product | glutamate synthase, NADH/NADPH, small subunit |
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| Protein accession | YP_003103353 |
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| Protein GI | 256379693 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGATC CCCAGGGCTT TCTCAAGCAC ACCCGCGCCG AGGCGAAGAA GCGGCCCGCG
ACCGAGCGCG CCGCCGACTG GGACGAGGTG TACCTCGACC AGGGGCCGGA GGTCCGGGAG
GCGCAGGTCC GCGTCCAGGC CACCCGGTGC ATGGACTGCG GCGTCCCGTT CTGCCACTCC
GGCAGCGCGG GCTGCCCGCT CGGCAACCTG ATCCCCGAGT GGAACGACCT GGTCCGCCGG
GGCGACTGGG AGTCCGCGTC GCACCGGTTG CACGCGACCA ACAACTTCCC GGAGTTCACC
GGCAGGCTGT GCCCGGCGCC GTGCGAGGCG GCGTGCGTGC TCGCCATCAC CCCCGACGCC
GGGGGAGCGG TGGCGATCAA GCGGGTCGAG CAGGCCATCG CCGACACCGC GTGGGAGAAC
GGCTCGGTCA AGGCCAGCCA GTCCCAGGTG TCCTCGGGCA AGAAGGTCGC CATCGTCGGC
TCCGGCCCCG CCGGGCTGGC CGCCGCCCAG CAGCTCACCC GCGCCGGGCA CGAGGTCACC
GTGTACGAGC GGGACGACCG GCTCGGCGGG CTGCTGCGGT ACGGCATCCC CGAGTTCAAG
ATGGAGAAGA AGGTCCTCGA CCGGCGCCTC GCGCAGCTGC GCAAGGAGGG CACGAGGTTC
GTGACCGGCT GCGAGGTCGG CGTCGACCTG ACCGTGGAGG AGCTGCGCGC GTCGTTCGAC
GCCGTGGTGC TCGCGGTCGG CGCGCTGCGC GGTCGCGACG ACACGACCAC GCCCGGCCGC
TCGCTCGACG GCGTCCACCT GGCGATGGAG CACCTGGTGC CCGCCAACCG CGCGTGCGAG
GGCGACGGGG CCCCCGCGAT CAGCGCGGCG GGCAAGCACG TGGTGGTCAT CGGCGGCGGC
GACACCGGCG CGGACTGCTA CGGCACGGCC GTGCGGCAGG GCGCGCTGTC GGTGACGCAG
CTCGACCAGT ACCCGCAGCC CCCGTCGCAG CGCGACGACG CGCGGTCCCC GTGGCCGGTG
TGGCCGTGGA TCCTGCGCAC CTACGCGGCG CACGAGGAGG GCGGCGAGCG GCGGTTCGCC
GTGGCCGTCG AGGAGTTCAC CGGCGAGGAC GGGCGCGTCA CGGCGGTCAA GCTGCGCAAG
GTGAAGGTGC AGCGGGACTC CACCGGCAGG CGCGTGGTGG TGCCGATGTC CGAGGAGTTC
GAGGAGCTGC CCGCCGACCT GGTGCTGCTC GCGATCGGCT TCGAGGGCGT CGAGCAGATG
CCGCTGCTGG ACGGGCTCGG GATCTCCCTG AGCGCCCGCA GCACGATCTC GTGCGGTTCG
GACTGGCAGA CCAGCGCGCC CGGCGTGTTC GTCTGCGGCG ACGCGCACCG AGGCGCGTCC
CTGGTGGTGT GGGCGATCGC GGAGGGCCGC TCGGTGGCCA ACGCGGTCGA CCGCCACCTG
ACCGGCTCGT CCGACCTGCC GTCCCCGGTG ATCCCGAACC AGCTGCCGCT GGCCGTGGTC
TGA
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| Protein sequence | MADPQGFLKH TRAEAKKRPA TERAADWDEV YLDQGPEVRE AQVRVQATRC MDCGVPFCHS
GSAGCPLGNL IPEWNDLVRR GDWESASHRL HATNNFPEFT GRLCPAPCEA ACVLAITPDA
GGAVAIKRVE QAIADTAWEN GSVKASQSQV SSGKKVAIVG SGPAGLAAAQ QLTRAGHEVT
VYERDDRLGG LLRYGIPEFK MEKKVLDRRL AQLRKEGTRF VTGCEVGVDL TVEELRASFD
AVVLAVGALR GRDDTTTPGR SLDGVHLAME HLVPANRACE GDGAPAISAA GKHVVVIGGG
DTGADCYGTA VRQGALSVTQ LDQYPQPPSQ RDDARSPWPV WPWILRTYAA HEEGGERRFA
VAVEEFTGED GRVTAVKLRK VKVQRDSTGR RVVVPMSEEF EELPADLVLL AIGFEGVEQM
PLLDGLGISL SARSTISCGS DWQTSAPGVF VCGDAHRGAS LVVWAIAEGR SVANAVDRHL
TGSSDLPSPV IPNQLPLAVV
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