| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5530 |
|---|
| Symbol | |
|---|
| ID | 8329736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6566485 |
|---|
| End bp | 6567720 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644945970 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003103194 |
|---|
| Protein GI | 256379534 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGGT ATGCGGTGGT CGGGACCGGG GCGCGGGCTC GGGTGCACGT CGCGGCCGTC
GAGCGGTACG GGGTGCTCGT CGGGCTCGCG GATCCGAACC CCGTCCGGAT CGCCGCGCAC
AACCGGCTGC TCGCCGCGCC CGTTCCCGCG TACCGGGCCG CCGACTTCAC CACCATGCTC
GCCGAGCAGT CGGTGGACGT CGCGGTGGTC ACCACCGTCG ACCGGCACCA CGCGCACTAC
GTCGTCGCCG CGCTCGAAGC CGGGTGCGAC GTGATCACCG AGAAGCCCAT GACCACCGAT
CCCGAGGGCG CCGCCGCGGT CGCGGACGCC GTGGCGCGGA CCGGGCGGCG GGTCGACGTC
GCGTTCAACT ACCGCTACCA CCCGGTGCAC GAGCGGGTCG CCGGGCTGCT CGCGGGCGGG
GTGGTCGGGC GGGTCGGGTC GGTGCACTTC GAGTGGTTCC TGGACGTGCG GCACGGCGCC
GACTACTTCC GCCGCTGGCA CCGCGACAAG GCGTCCTCCG GCGGGCTGCT CGTGCACAAG
TCCACCCACC ACTTCGACCT GGTCAACTGG TGGCTCGGCG CCGCGCCGGT CAGCGCGTAC
GCCCAGGGCT CGCTGTTCTT CTACGGCGAG GAGAGCGGCA AGCGGCACGG GCGGCACCGG
GACTACGCGC GCGTGCACGG CTCGCCCGAG GCGGACGGCG ACCCGTTCGC GCTGCACCTC
GCCGAGGACG GGTGGCTGCG CGAGCTGTAC CTGGACGCCG AGCCCGAGGA CGGCTACCGG
CGCGACCAGA ACCCGTTCGC GCCCGGCGTC ACCATCGAGG ACGACCTGGC CGTCCTGGTC
CGGTACGACA CCGGGGCGAG CATGACCTAC CACCTGACGG CGTACTCGCC GAAGGAGGGC
TACCGCGTGG TGTTCAACGG TGACGCGGGC AGGCTGGAGC TGGAGGTGGT CGAGACCTCC
TGGGTGAGCG GCCAGCACGC GGCGGGCGAA CCGGGCTGGG TGCGCCTGAC CGCGCAGCCG
CTGTTCGGCC GGGCGAGCGA GCTGCCGACC GAGCACGGCG GCGGCCACCA CCTGGCCGAC
CAGCGGATGA CCGCCCAGCT CTACGGCCCC CCGATCCCGG ACCCGCTCGG CCGCCGCGCC
GACCACACCG ACGGCATCCG CTCGCTCCTC ACCGGCTTCG CCGCGAACCG CAGCCTGACC
ACCGGCCAAC CGGTCGCGGT CGCCGACCTG CTCTGA
|
|---|
| Protein sequence | MRRYAVVGTG ARARVHVAAV ERYGVLVGLA DPNPVRIAAH NRLLAAPVPA YRAADFTTML
AEQSVDVAVV TTVDRHHAHY VVAALEAGCD VITEKPMTTD PEGAAAVADA VARTGRRVDV
AFNYRYHPVH ERVAGLLAGG VVGRVGSVHF EWFLDVRHGA DYFRRWHRDK ASSGGLLVHK
STHHFDLVNW WLGAAPVSAY AQGSLFFYGE ESGKRHGRHR DYARVHGSPE ADGDPFALHL
AEDGWLRELY LDAEPEDGYR RDQNPFAPGV TIEDDLAVLV RYDTGASMTY HLTAYSPKEG
YRVVFNGDAG RLELEVVETS WVSGQHAAGE PGWVRLTAQP LFGRASELPT EHGGGHHLAD
QRMTAQLYGP PIPDPLGRRA DHTDGIRSLL TGFAANRSLT TGQPVAVADL L
|
|---|
| |