Gene Amir_5515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5515 
Symbol 
ID8329721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6549463 
End bp6550446 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content72% 
IMG OID644945955 
Producthypothetical protein 
Protein accessionYP_003103179 
Protein GI256379519 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG ACAAGGCGAG CCCGACCACG TCGGGCGGGG ACTCCCGCGA CAACAACTCC 
CGCGACAACG GGGTGCACAC CGACCCGCAC GGGGCGAGCG ACCTGGCCGA GGCGGTCCGG
GCCGAGCGGC CGGGCGTCGA GGCGGACGGG TCGCGGACCG GGTACCGGGC CTCGCGGACG
CTGCCGATCC GGGTCGAGCT GGTCAGGCAG CTGCTGCGGC GGCGGACCCA GCTGGTGCTC
GGGTTCCTGG TGCTGCTGCC GGTGATCCTG GTGGTGGCGT TCGAGCTGGG CGAGGACGCG
CCGAACCGCC GGTCCGGCGG GTTCGTCGAC CTGGCCACGG CGAGCGGGGT GAACTTCGTC
GTCCTGACGC TGTTCGTGTG CTCCAGCTTC CTGCTGCCGA TGATCGTGGC CCTGTTCTTC
GGGGACACGA TCGCCAGCGA GGCGTCCTGG TCCAGCCTGA AGTACCTGCT GGCCGCGCCG
ATCCCCCGGC ACCGGCTGCT GCGGCGCAAG GCCGCGGCCT CCGGCATCCT GTCGGTGCTG
TCGCTGCTGG TGCTGCCGGG GACCGCGCTG CTGGTCGGCG TGCTCTGGTA CGGGGCGGGC
GAGCTGGTCA GCCCCACCGG CGAGGCCGCG CCGTTCGCGG ACGGCGTCCT CGGCGTGTTC
CTGGCGGTCT GCTACATCTC GGTGCAGCTG TTCTGGGTCG CCGGGCTGGC GCTGTACCTG
TCGGTGTCCA CGGACGCGCC GCTCGGCGCG GTCGGCGGGG CGGTGCTGGC GTCGATCCTG
TCGCAGATCC TGGACCAGAT CACGGCGCTG GAGGACCTGC GGAACTACCT GCCCACGCAC
TACGCGCTGG CGTGGATGGA CCTGCTGTCC ACCGACATCG ACTGGTCGCA GATGGCCAAG
GGGGTGTTCT CCGCGCTGGC CTACGGGGCG CTGTTCTCGT TCCTGGCGGC GCGGAAGTTC
AGCACCAAGG ACATCACCAG CTGA
 
Protein sequence
MSDDKASPTT SGGDSRDNNS RDNGVHTDPH GASDLAEAVR AERPGVEADG SRTGYRASRT 
LPIRVELVRQ LLRRRTQLVL GFLVLLPVIL VVAFELGEDA PNRRSGGFVD LATASGVNFV
VLTLFVCSSF LLPMIVALFF GDTIASEASW SSLKYLLAAP IPRHRLLRRK AAASGILSVL
SLLVLPGTAL LVGVLWYGAG ELVSPTGEAA PFADGVLGVF LAVCYISVQL FWVAGLALYL
SVSTDAPLGA VGGAVLASIL SQILDQITAL EDLRNYLPTH YALAWMDLLS TDIDWSQMAK
GVFSALAYGA LFSFLAARKF STKDITS