| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5485 |
|---|
| Symbol | |
|---|
| ID | 8329691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6516406 |
|---|
| End bp | 6517590 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644945925 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_003103149 |
|---|
| Protein GI | 256379489 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000220898 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAAAA CCCGCAGGAT CAACTGGGAC GTGCTGCGCG TGCTCGCCGT GCTGGCCGTC
GTGCTGCAAC ACGCGACCCA CGCCGGGCCG AACGTCCACC CGGAGATCGG CGAACCCCTG
TTCACCGTGT CCCTGGAGAT GGGCGCGAGC TCGCTGGTGG TGATCTCCGC GTTCTTCGCC
TGCGCCTCGC TGGCCAAGGG CGACCGCGCC TGGTTCCTGC GCAACCGGCT CGCCCGCCTG
CTCCCCGCCT ACGCGGTGGC GGCCTGCCTG ACCTACTGGG TCCTCGTGCA CCTGGCCCCC
GAGGGCTGGT CGCACCTCGA ACCCCGCGAC CTGGTCCTCA ACATCCTCAT GCTGCAGAAC
TGGCTCCCGG ACGTCCGGCT GGTCGACTTC TCCTACTGGA CCCTGCCCGT CCAGCTCACC
GGGTTCGTCG CGGGCGCGCT GCTCGCCTCC CGCGTCCGCG GTCGCGCGCT GCCCGCGCTG
CTCTGGGCCC TCGTGCTCGG ACCGCTGGTC ATGCGCGAGT GGATCGGCGA ACCCGGTCTG
CTGAAGCTGC TCTACGACGG CCTCGGCGCG CACCGCGCCC AGCTGTTCGC CATGGGCGTC
GGCGTGTGGC TGTGGTCCCG CGAACGGCTC GGGAACCGGC ACCTGACCGC GCTGCTGATC
ACCGCGCTCG GCGCCCAGTA CCTGCACAGC GACAACCTGG AGGGCACCGC CGCGCTCGGC
GTCGTGCTCG TCGGGGTGTG CGCCGCGGCA GCCGGGCCGG ACTGGGACGT CGCGCCGCTG
CGCGCGCTCG CCACGCCGAT CCGCTGGCTC GCGGGCATCT CCTACGGCGT GTACCTGGTC
CACCAGGAGA TCGGCTACGT GGTGATGGAG CGCCTGACCC CGTGGGGCCC GGCCGTCCAG
CTCGCCGCGT TCCTGGCCAC CGCCGTCCTG CTCGGCTGGG CGCTGACCGC CCTGGTGGAA
CGGCCCGCGC ACCGCCTGCT CACCGCCAGC CACCGCCCCG CGCTCGCCCG GTGGCTGCTC
GTCGTCGGAC TGCGCGCTCA GAGCCACCTG GGCAACGTCG GCACCCGGCC CTCCAGGCCG
CTGCCGTCGC CGCGCCCGGT CAGCCAGCCG ATCACCTCGG CCGCGCCGCC GCTGATCACC
GGCGCGTCGC TGCCCGCCCC CGCGGGCAAC TCCCAGGTGC GCTGA
|
|---|
| Protein sequence | MPKTRRINWD VLRVLAVLAV VLQHATHAGP NVHPEIGEPL FTVSLEMGAS SLVVISAFFA
CASLAKGDRA WFLRNRLARL LPAYAVAACL TYWVLVHLAP EGWSHLEPRD LVLNILMLQN
WLPDVRLVDF SYWTLPVQLT GFVAGALLAS RVRGRALPAL LWALVLGPLV MREWIGEPGL
LKLLYDGLGA HRAQLFAMGV GVWLWSRERL GNRHLTALLI TALGAQYLHS DNLEGTAALG
VVLVGVCAAA AGPDWDVAPL RALATPIRWL AGISYGVYLV HQEIGYVVME RLTPWGPAVQ
LAAFLATAVL LGWALTALVE RPAHRLLTAS HRPALARWLL VVGLRAQSHL GNVGTRPSRP
LPSPRPVSQP ITSAAPPLIT GASLPAPAGN SQVR
|
|---|
| |