| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5477 |
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| Symbol | |
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| ID | 8329683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6505946 |
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| End bp | 6506332 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644945917 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_003103141 |
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| Protein GI | 256379481 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCTCCA AGGTCGAGGT TCGGACCGAG AACGCGCCTA CCCCGGTGGC GAGGTTCTCC
CAGGGCGTCC GCAAGGGCAA CCTGCTCCAG GTCGCCGGGC AGGTCGCGTT CCACCCGGAG
ACCGGGGAGA TCGTCGGCAC GACCGTCGCC GAGCAGACCG CGCAGGCGAT GCGCAACGTC
ATCGCCGTGC TGGAGGCGGG CGGCGCGTCG CTGGCCGACG TCGTGATGCT GCGCGTCTAC
CTGACCGACA CCGCGCACTT CGGCGAGATG AACGACGCGT ACGGCGAGTT CATGACCGAG
GGGCCGTTCT CGGCGCGCAC CACGGTCTAC GTCGGGCTCC CCGCCGGGCT GCTGGTCGAG
ATCGACGCGC TGGCCGTCCT GGACTGA
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| Protein sequence | MGSKVEVRTE NAPTPVARFS QGVRKGNLLQ VAGQVAFHPE TGEIVGTTVA EQTAQAMRNV
IAVLEAGGAS LADVVMLRVY LTDTAHFGEM NDAYGEFMTE GPFSARTTVY VGLPAGLLVE
IDALAVLD
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