Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5408 |
Symbol | |
ID | 8329610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6421844 |
End bp | 6423712 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644945845 |
Product | serine/threonine protein kinase |
Protein accession | YP_003103073 |
Protein GI | 256379413 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.212471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGCTG AGACGTTCGG GCCGTACCGC GTCGAGGGCC TGCTCGGTCG CGGCGGCATG GGCGAGGTGC ACCGCGCCTA CGACACCGCG CACGACCGGG TCGTGGCGCT GAAGCGGCTG TCGGCGGTGT ACCACTCGGA CGCCGAGTTC CGGGCCCGGT TCCGGCGGGA GTCGCAGGTC GCGGCCCGGT TGCGGGAGCC GCACGTGATC CCGATCCACG CCTACGGCGA GATCGACGGC ACGCTGTACC TGGACATGCG GCTGGTCGAG GGCGAGGACC TGTCGGACGT GCTGGAGCGC GGGCCGATCG AGCCCGAGCG GGCGGTGCGG ATCGTGCGGC AGACCGCGAG CGCGCTGGAC GCCGCGCACG CCGACGGGCT GGTGCACCGG GACGTGAAGC CGTCCAACAT CCTGCTGTCG GCCGGGGACT TCGTGTACCT GGTCGACTTC GGCATCGCCC GCAGCGCCGC CGGGGACAGC ACGCACATCA CCGCGTCCGG CGAGGTGCTG GGGACGCTGG ACTACATGGC GCCCGAGCGG TTCAGCGGGA CCGACGTGAG CGGCGCGGTG GACGTGTACG CGCTGGCCGG GGTGCTGTTC GCCTGCCTGA CCGGGCGCAG GCCGTTCACC GCCGAGGGCA CGGCCGCGCA GATCTGGGCG CACATGCAGG AGGAGCCGCC GAGGCCGTCC GAGGTGCGGC CGGGGGTGCC CGCGGCGCTG GACGCGGTGA TCGCGCGCGG CATGGCGAAG GACCCGGCCG CCCGGTACCC GACCGCGAGC GCCCTGGCCG AGGCGGCTGC GGCGGCGCTG GACGGGACGG CGGTGGTGCC CACCGGGACG CGGGTGCTCC AGCAGACCGG GCCGCAGGGG GAGCCGCAGC GGGTGGGGCC GCCCTCGCAG CCGGTCCCGG CGCAGACCCC GCCCGCCCAG CACCAGCCAG CCCAGCAGCA GCCAGCGCAG AGCCAGTCAG CGCAGAGCCG GCCAGCGCGC ACCGCGCAGC AGCACCCGCC GGTGCCGACC GCGCCGAACA CCCGCCCTCA GCAGCACGGG CCGTTCTCCG GACCGCAGCA GACGTCGTTC TCCGGGCCCC GGCAGACCTC CTTCTCCGGG CCCCAGCGGT TCCCGCTCTC CGGCCCCCAG CCGGGCTGGG GCCACCCGCC CGCGACCGCC TCGAAGCGGT CCGTGCAGCT CGCCGTGCTC GGCGCGGCGC TGGTGGTGCT GGTGGTGGCG GGCGCGATCG GCGCGGCGAC CTGGCCGTGG GGCGGGAAGG CGCAGACCGG TCAGGGCGGT GGCACGAGCA GCACCGCGTC GACCACGACC ACCACCGGGA CCACCGGGAC CACCACCGAC ACGACGACCA CCGCCCCCCG CAGCGGCTCC GCCGAGGACC AGCGGGTGCT GTCCGAGCGG CTGCCGCTGG TGTACCGGCT GTCGTCCTCG TGCTCGGACG GCGACGTGGG CGGCACCGGC GCGGTGGCCG CGGCGACCTG CGGTGAGCCC AAGTCGGAGG TGGCGGGCAC GACCCCGCCG ACCAGGGCCG ACTTCCTGCT GTTCGCCGAC CGCGCCGCGC AGGACAAGCA CTTCCAGGAC CTGGTCAAGG CCAACGACAT CCCGCGCGAC GACACCCAGG GCGGCTGCCG CCCCACCACG CAGAAGACGC ACTACTCGAC CTACTGGCGC CAGGTCACCG GGGTGACCGA GGGCGACTTC ACCACGTGCT TCGTCAAGGA CGGCAGCGGC CAGGTGTGGT GGGTGGACAC CGAGACGCTG ACCACCGGCG TGCTGCTGTC CACCACCGCC ACCACCCCGG ACAAGCTGGA GGCGCTGGAC CTGTGGTGGA ACATGTGGGT GCTGTCCCAG GACCGCTAG
|
Protein sequence | MSAETFGPYR VEGLLGRGGM GEVHRAYDTA HDRVVALKRL SAVYHSDAEF RARFRRESQV AARLREPHVI PIHAYGEIDG TLYLDMRLVE GEDLSDVLER GPIEPERAVR IVRQTASALD AAHADGLVHR DVKPSNILLS AGDFVYLVDF GIARSAAGDS THITASGEVL GTLDYMAPER FSGTDVSGAV DVYALAGVLF ACLTGRRPFT AEGTAAQIWA HMQEEPPRPS EVRPGVPAAL DAVIARGMAK DPAARYPTAS ALAEAAAAAL DGTAVVPTGT RVLQQTGPQG EPQRVGPPSQ PVPAQTPPAQ HQPAQQQPAQ SQSAQSRPAR TAQQHPPVPT APNTRPQQHG PFSGPQQTSF SGPRQTSFSG PQRFPLSGPQ PGWGHPPATA SKRSVQLAVL GAALVVLVVA GAIGAATWPW GGKAQTGQGG GTSSTASTTT TTGTTGTTTD TTTTAPRSGS AEDQRVLSER LPLVYRLSSS CSDGDVGGTG AVAAATCGEP KSEVAGTTPP TRADFLLFAD RAAQDKHFQD LVKANDIPRD DTQGGCRPTT QKTHYSTYWR QVTGVTEGDF TTCFVKDGSG QVWWVDTETL TTGVLLSTTA TTPDKLEALD LWWNMWVLSQ DR
|
| |