| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5385 |
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| Symbol | |
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| ID | 8329587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6399804 |
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| End bp | 6400559 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644945822 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_003103050 |
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| Protein GI | 256379390 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCCTCCC CGATCACCTT CACCTCCGCC GGGACCGGCG CGGCCAGCAG CTACGGCGCC
CCCAGCAACC TGCAGAAGGC CGTGCTGAGC GTGCACAAGC CGCCGAAGGC CGGTGGCGCC
GCCAAGCCCG GCGAGCTGAT GCACGACATC ACCTTCCAGT TCAACCCGCG CGAGCTGTCG
CTGACCAAGT CGACCAGGTG GGAGCGCGAC CTCCAGCCCA ACCACAAGAA GTCCGGCACC
CCCGAGTACA AGGGCGCCGA GCCGGTGAAG CTGTCCCTGG AGGTGTTCCT GGACTCCACC
GAGCACATGG ACGACGGCGT GGTGCGCAAG GTGGAGCAGC TGTTCGCCTG CTGCGTGCCG
ACCGAGGACA GCCGCCGGCA GGGCAAGGGC TCCCCGCCGT GGGTGGTGTT CAAGTGGGGC
GGCATGACCG GGTTCCCGGC GTTCGTCGCG AGCGTCGCCG CCAAGTACAC CCTGTTCACC
CCGGCCGGAG TGCCGGTGCG CGCGGTGTGC ACGGTGTCCC TGGAGGAGAT CTCCGGCGAG
CTGGGCGGCC AGAACCCCAC CTCCGGCGCG CTCGCCGCCC GCGACTCGCA CGTGCTGGTC
GCGGGCGACA CGCTCCAGTC GCTGGCGTAC CGGGCCTACG GCGACCCCAA CCTGTGGCGG
GAGATCGCCG AGGCCAACAA CATCGACGAC CCGATGCGGC TGCGCCCCGG CTCCCGGCTG
CTGCTGCCCG CGCTGGAGGA GGTGCGCGGT GGCTGA
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| Protein sequence | MASPITFTSA GTGAASSYGA PSNLQKAVLS VHKPPKAGGA AKPGELMHDI TFQFNPRELS
LTKSTRWERD LQPNHKKSGT PEYKGAEPVK LSLEVFLDST EHMDDGVVRK VEQLFACCVP
TEDSRRQGKG SPPWVVFKWG GMTGFPAFVA SVAAKYTLFT PAGVPVRAVC TVSLEEISGE
LGGQNPTSGA LAARDSHVLV AGDTLQSLAY RAYGDPNLWR EIAEANNIDD PMRLRPGSRL
LLPALEEVRG G
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